Files in jproney/bpinference
Bayesian Estimation of Branching Proccess Parameters
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/bp_model.R
R/calculate_moments.R
R/simulation.R
R/stan_utils.R
R/sysdata.rda
README.md
bpinference.Rproj
examples/apoptosis_with_noise.R
examples/one_type.R
examples/one_type_double_logistic.R
examples/one_type_logistic_birth.R
examples/two_type.R
man/bp.Rd
man/bp_model.Rd
man/bp_model_simple_birth_death.Rd
man/bpsims.Rd
man/calculate_moments.Rd
man/check_valid.Rd
man/create_stan_data.Rd
man/exp_to_stan.Rd
man/generate.Rd
man/new_bp_model.Rd
man/new_prior_dist.Rd
man/parse_prior.Rd
man/prior_dist.Rd
man/stan_data_from_simulation.Rd
man/uniform_initialize.Rd
man/validate_bp_model.Rd
man/validate_prior_dist.Rd
stanfiles/README.md
stanfiles/multitype_loo_block.stan
stanfiles/multitype_noise_template.stan
stanfiles/multitype_template.stan
stanfiles/one_type_template.stan
stanfiles/simple_birth_death_loo_block.stan
tests/testthat.R
tests/testthat/test_bpmodel.R
tests/testthat/test_conversion.R
tests/testthat/test_expression_parsing.R
tests/testthat/test_generation.R
tests/testthat/test_moments.R
tests/testthat/test_priors.R
tests/testthat/test_simulation.R
vignettes/.gitignore
vignettes/1_type_bd.png
vignettes/double_log_inference_plot.png
vignettes/first-model.Rmd
vignettes/first-model.pdf
vignettes/one-type-double-logistic.Rmd
vignettes/two-type-inference.Rmd
vignettes/two-type-inference.pdf
