skyLine: Classic Skyline Estimates
In jrfaulkner/bnps: Shrinkage-Prior Markov Random Field Smoothing
Description
Usage
Arguments
Value
View source: R/phylo_functions.r
Description
Classic Skyline estimates for isochronous or heterochronous data.
Usage
1
skyLine(phy)
Arguments
phy
a list containing a numeric vector of coalescent times (coal_times), a numeric vector of sampling times (samp_times, and a integer vector of number of samples taken at each sampling time (n_sampled).
Value
A list containing a vector of indices k, a vector of midpoints between coalescent times mid_ctime, and a vector of skyline population estimates theta.
jrfaulkner/bnps documentation built on Sept. 27, 2020, 12:34 p.m.
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Description Usage Arguments Value
View source: R/phylo_functions.r
Description
Classic Skyline estimates for isochronous or heterochronous data.
Usage
1 | skyLine(phy)
|
Arguments
phy |
a list containing a numeric vector of coalescent times ( |
Value
A list containing a vector of indices k, a vector of midpoints between coalescent times mid_ctime, and a vector of skyline population estimates theta.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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