maize.genes.v3_to_v4.map: Unpublished map between B73 v3 and v4 gene model ids
In jrwalsh/MaizeMap: Container for lists and mapping files related to Maize identifiers from multiple databases.
Description
Map between B73 v3 and v4 gene model ids generated by Maggie using SynMap. This includes merged v3 models
and split v3 models. B73 V3 ids are of the form GRMZM and B73 v4 ids are of the form Zm. V3 also
includes some "AC" ids, but excludes some non-standard ids. The "AC" legacy ids were generated from BAC's.
The suffix on the AC ids, "FG###" refers to the sequence the expressing segment appeared on that particular BAC.
This is the revised mapping (version 2) created Jan 2018.
Usage
1
Format
A data frame columns [v3_id, v4_id, type].
jrwalsh/MaizeMap documentation built on May 19, 2019, 2:57 a.m.
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Description
Map between B73 v3 and v4 gene model ids generated by Maggie using SynMap. This includes merged v3 models and split v3 models. B73 V3 ids are of the form GRMZM and B73 v4 ids are of the form Zm. V3 also includes some "AC" ids, but excludes some non-standard ids. The "AC" legacy ids were generated from BAC's. The suffix on the AC ids, "FG###" refers to the sequence the expressing segment appeared on that particular BAC. This is the revised mapping (version 2) created Jan 2018.
Usage
1 |
Format
A data frame columns [v3_id, v4_id, type].
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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