plotSamplesByName: Plots expression distributions of genes selected by name
In jsieker/DipEx0.3: Analysis of RNAseq data distributions through visualization and Hartigan's Dip test
Description
Usage
Arguments
Value
Author(s)
References
Description
Allows the user to plot the expression distributions of up to 8 genes of their choice.
Usage
1
plotSamplesByName(nameList, RNAdata)
Arguments
nameList
The names of the desired genes should be concatenated into this variable. If more than eight gene names are specified, function will typically fail. (ex. li <- c("Ascl3", "Bambi", "Pols2")) ). Pay attention to proper capitalization in specifying gene names.
RNAdata
This argument specifies the RNAseq dataset from which the specified genes' expressional data will be taken. It may take the form of raw or normalized data.
Value
A plot called 'x1' is returned from this function.
Author(s)
Software authors: Sohyon Lee, Jeremy Sieker, Kristin Baldwin
References
H. Wickham. ggplot2: Elegant Graphics for Data Analysis. Springer-Verlag New York, 2009.
jsieker/DipEx0.3 documentation built on May 30, 2019, 7:14 p.m.
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Description Usage Arguments Value Author(s) References
Description
Allows the user to plot the expression distributions of up to 8 genes of their choice.
Usage
1 | plotSamplesByName(nameList, RNAdata)
|
Arguments
nameList |
The names of the desired genes should be concatenated into this variable. If more than eight gene names are specified, function will typically fail. (ex. li <- c("Ascl3", "Bambi", "Pols2")) ). Pay attention to proper capitalization in specifying gene names. |
RNAdata |
This argument specifies the RNAseq dataset from which the specified genes' expressional data will be taken. It may take the form of raw or normalized data. |
Value
A plot called 'x1' is returned from this function.
Author(s)
Software authors: Sohyon Lee, Jeremy Sieker, Kristin Baldwin
References
H. Wickham. ggplot2: Elegant Graphics for Data Analysis. Springer-Verlag New York, 2009.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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