Files in jsocolar/flocker
Flexible Occupancy Estimation with Stan
.Rbuildignore
.github/.gitignore
.github/workflows/check-standard.yaml
.github/workflows/covr.yml
.github/workflows/pkgdown.yaml
.gitignore
CRAN-SUBMISSION
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
NEWS.md
R/data.R
R/fitted_flocker.R
R/flock.R
R/get_Z.R
R/log_lik_occupancy.R
R/loo.R
R/make_flocker_data.R
R/make_occupancy_lpmf.R
R/occupancy_families.R
R/predict_flocker.R
R/simulate_flocker_data.R
R/single_C-prediction-epred.R
R/utils.R
README.md
_pkgdown.yml
cran-comments.md
data-raw/example_flocker_model.R
data/example_flocker_model_single.rda
inst/WORDLIST
inst/cache_vignettes.R
inst/rmd/adding_a_family.Rmd
man/example_flocker_model_single.Rd
man/figures/flocker.png
man/figures/flocker_sticker.png
man/figures/logo2.png
man/figures/logo3.png
man/figures/make_sticker.R
man/figures/sbc_vignette/data-augmented-1.png
man/figures/sbc_vignette/data-augmented-2.png
man/figures/sbc_vignette/data-augmented-3.png
man/figures/sbc_vignette/multi-auto-eq-1.png
man/figures/sbc_vignette/multi-auto-eq-2.png
man/figures/sbc_vignette/multi-auto-eq-3.png
man/figures/sbc_vignette/multi-auto-ex-1.png
man/figures/sbc_vignette/multi-auto-ex-2.png
man/figures/sbc_vignette/multi-auto-ex-3.png
man/figures/sbc_vignette/multi-colex-eq-1.png
man/figures/sbc_vignette/multi-colex-eq-2.png
man/figures/sbc_vignette/multi-colex-eq-3.png
man/figures/sbc_vignette/multi-colex-ex-1.png
man/figures/sbc_vignette/multi-colex-ex-2.png
man/figures/sbc_vignette/multi-colex-ex-3.png
man/figures/sbc_vignette/rep-constant-1.png
man/figures/sbc_vignette/rep-constant-2.png
man/figures/sbc_vignette/rep-constant-3.png
man/figures/sbc_vignette/rep-varying-1.png
man/figures/sbc_vignette/rep-varying-2.png
man/figures/sbc_vignette/rep-varying-3.png
man/fitted_flocker.Rd
man/flock.Rd
man/flocker_stancode.Rd
man/flocker_standata.Rd
man/get_Z.Rd
man/get_flocker_prior.Rd
man/log1m_inv_logit.Rd
man/log_inv_logit.Rd
man/log_lik_flocker.Rd
man/loo_compare_flocker.Rd
man/loo_flocker.Rd
man/make_flocker_data.Rd
man/make_flocker_data_augmented.Rd
man/make_flocker_data_dynamic.Rd
man/make_flocker_data_static.Rd
man/predict_flocker.Rd
man/simulate_flocker_data.Rd
man/standard_mfd_checks.Rd
tests/spelling.R
tests/testthat.R
tests/testthat/setup.R
tests/testthat/test-fitted_flocker.R
tests/testthat/test-flock.R
tests/testthat/test-get_Z.R
tests/testthat/test-log_lik_functions.R
tests/testthat/test-loo_flocker.R
tests/testthat/test-make_flocker_data.R
tests/testthat/test-make_occupancy_lpmf_functions.R
tests/testthat/test-occupancy_families.R
tests/testthat/test-predict_flocker.R
tests/testthat/test-utils.R
vignettes/.gitignore
vignettes/articles/sbc.Rmd
vignettes/articles/sbc.Rmd.orig
vignettes/augmented_models.Rmd
vignettes/augmented_models.Rmd.orig
vignettes/flocker_format.Rmd
vignettes/flocker_tutorial.Rmd
vignettes/flocker_tutorial.Rmd.orig
vignettes/multiseason_models.Rmd
vignettes/nonlinear_models.Rmd
vignettes/nonlinear_models.Rmd.orig
