README.md

In jsta/glmgui: glmGUI

glmgui

Fork of the glmgui package: https://doi.org/10.5281/zenodo.2025865

Installation

devtools::install_github("jsta/glmgui")

Usage

library(glmgui)

glmGUI()

Packaging

Bug fixes

• Fixed issue with glmGUI hanging on model build

• Removed multibyte degree symbols causing errors in devtools::check

Changes

• Replace use of the gWidgets package with gWidgets2

• Install dependencies during package install rather than in glmGUI()

• Add roxygen2 documentation

Wishlist

• Add ability to explore output of previously run models

• Resolve namespace conflicts between glmtools and rLakeAnalyzer

• Output graphs do not change when selecting different variables

CRANification

devtools::check() output

#> Updating glmgui documentation
#> Warning: roxygen2 requires Encoding: UTF-8
#> Writing NAMESPACE
#> Loading glmgui
#> Writing NAMESPACE
#> ── Building ───────────────────────────────────────────────────────────────────────── glmgui ──
#> Setting env vars:
#> ● CFLAGS    : -Wall -pedantic
#> ● CXXFLAGS  : -Wall -pedantic
#> ● CXX11FLAGS: -Wall -pedantic
#> ───────────────────────────────────────────────────────────────────────────────────────────────
#>   
   checking for file ‘/home/jose/R/scripts/glmgui/DESCRIPTION’ ...

✔  checking for file ‘/home/jose/R/scripts/glmgui/DESCRIPTION’
#>

─  preparing ‘glmgui’:
#>

   checking DESCRIPTION meta-information ...

✔  checking DESCRIPTION meta-information
#>

─  checking for LF line-endings in source and make files and shell scripts
#>

─  checking for empty or unneeded directories
#> ─  looking to see if a ‘data/datalist’ file should be added
#>

─  building ‘glmgui_1.0.tar.gz’
#>


#> 
── Checking ───────────────────────────────────────────────────────────────────────── glmgui ──
#> Setting env vars:
#> ● _R_CHECK_CRAN_INCOMING_USE_ASPELL_: TRUE
#> ● _R_CHECK_CRAN_INCOMING_REMOTE_    : FALSE
#> ● _R_CHECK_CRAN_INCOMING_           : FALSE
#> ● _R_CHECK_FORCE_SUGGESTS_          : FALSE
#> ── R CMD check ────────────────────────────────────────────────────────────
#>   
─  using log directory ‘/tmp/RtmpnENyaj/glmgui.Rcheck’
#>

─  using R version 3.5.2 (2018-12-20)
#> ─  using platform: x86_64-pc-linux-gnu (64-bit)
#> ─  using session charset: UTF-8
#>

─  using options ‘--no-manual --as-cran’ (658ms)
#>

✔  checking for file ‘glmgui/DESCRIPTION’
#> ─  this is package ‘glmgui’ version ‘1.0’
#> ✔  checking package namespace information
#>    checking package dependencies ...

✔  checking package dependencies (1.1s)
#>

✔  checking if this is a source package
#> ✔  checking if there is a namespace
#>

   checking for executable files ...

✔  checking for executable files
#>

✔  checking for hidden files and directories
#> ✔  checking for portable file names
#>    checking for sufficient/correct file permissions ...

✔  checking for sufficient/correct file permissions
#> ✔  checking serialization versions
#>    checking whether package ‘glmgui’ can be installed ...

✔  checking whether package ‘glmgui’ can be installed (3.1s)
#>

   checking installed package size ...

N  checking installed package size
#>

     installed size is 21.6Mb
#>      sub-directories of 1Mb or more:
#>

       extdata  21.3Mb
#>

   checking package directory ...

✔  checking package directory
#>    checking DESCRIPTION meta-information ...

✔  checking DESCRIPTION meta-information
#>

N  checking top-level files
#>    Non-standard file/directory found at top level:
#>      ‘images’
#> ✔  checking for left-over files
#> ✔  checking index information
#>    checking package subdirectories ...

✔  checking package subdirectories
#>

   checking R files for non-ASCII characters ...

✔  checking R files for non-ASCII characters
#>

   checking R files for syntax errors ...

✔  checking R files for syntax errors
#>

   checking whether the package can be loaded ...

✔  checking whether the package can be loaded (453ms)
#>

   checking whether the package can be loaded with stated dependencies ...

✔  checking whether the package can be loaded with stated dependencies (452ms)
#>

   checking whether the package can be unloaded cleanly ...

✔  checking whether the package can be unloaded cleanly (439ms)
#>

   checking whether the namespace can be loaded with stated dependencies ...

✔  checking whether the namespace can be loaded with stated dependencies (439ms)
#>    checking whether the namespace can be unloaded cleanly ...

✔  checking whether the namespace can be unloaded cleanly (455ms)
#>

   checking loading without being on the library search path ...

✔  checking loading without being on the library search path (486ms)
#>

   checking dependencies in R code ...

W  checking dependencies in R code (819ms)
#>

   'library' or 'require' calls not declared from:
#>      ‘GLMr’ ‘glmtools’
#>    'library' or 'require' calls in package code:
#>      ‘GLMr’ ‘glmtools’
#>      Please use :: or requireNamespace() instead.
#>      See section 'Suggested packages' in the 'Writing R Extensions' manual.
#>    checking S3 generic/method consistency ...

✔  checking S3 generic/method consistency (915ms)
#>

   checking replacement functions ...

✔  checking replacement functions (500ms)
#>

   checking foreign function calls ...

✔  checking foreign function calls (713ms)
#>

   checking R code for possible problems ...

N  checking R code for possible problems (7.3s)
#>

   build_model: no visible binding for '<<-' assignment to
#>      ‘label_status_build’
#>    build_model: no visible binding for global variable
#>      ‘label_status_build’
#>    build_model: no visible binding for global variable ‘List_values’
#>    build_model: no visible binding for global variable ‘button_build’
#>    build_model: no visible binding for '<<-' assignment to ‘dir_output’
#>    build_model: no visible binding for global variable ‘dir_output’
#>    build_model: no visible global function definition for ‘read_nml’
#>    build_model: no visible global function definition for ‘get_nml_value’
#>    build_model: no visible global function definition for ‘set_nml’
#>    build_model: no visible binding for global variable ‘List_parameter’
#>    build_model: no visible global function definition for ‘write_nml’
#>    build_model: no visible binding for global variable
#>      ‘checkbox_Level_plot’
#>    build_model: no visible binding for global variable
#>      ‘checkbox_Level_rmse’
#>    build_model: no visible binding for global variable ‘dir_field_level’
#>    build_model: no visible binding for global variable
#>      ‘checkbox_Temp_plot’
#>    build_model: no visible binding for global variable
#>      ‘checkbox_Temp_rmse’
#>    build_model: no visible global function definition for
#>      ‘compare_to_field’
#>    build_model: no visible binding for global variable ‘dir_field_temp’
#>    build_model: no visible global function definition for ‘dev.cur’
#>    build_model: no visible global function definition for ‘plot’
#>    build_model: no visible binding for global variable
#>      ‘checkbox_Temp_plot2’
#>    build_model: no visible binding for global variable
#>      ‘checkbox_Temp_plot3’
#>    build_model: no visible binding for global variable
#>      ‘checkbox_Temp_plot4’
#>    build_model: no visible binding for '<<-' assignment to ‘button_build’
#>    calculate_SI_value: no visible binding for '<<-' assignment to
#>      ‘dir_output’
#>    calculate_SI_value: no visible binding for global variable ‘dir_output’
#>    calculate_SI_value: no visible global function definition for
#>      ‘read_nml’
#>    calculate_SI_value: no visible global function definition for
#>    ‘get_nml_

     ‘get_nml_value’
#>    calculate_SI_value: no visible global function definition for ‘set_nml’
#>    calculate_SI_value: no visible global function definition for
#>      ‘write_nml’
#>    calculate_SI_value: no visible global function definition for
#>      ‘compare_to_field’
#>    calculate_SI_value: no visible binding for global variable
#>      ‘dir_field_temp’
#>    calculate_SI_value: no visible binding for global variable
#>      ‘dir_field_level’
#>    calculate_SI_value: no visible global function definition for
#>      ‘write.csv’
#>    calculate_SI_value: no visible global function definition for ‘dev.cur’
#>    calculate_SI_value: no visible global function definition for ‘par’
#>    calculate_SI_value: no visible global function definition for ‘barplot’
#>    calculate_aov: no visible global function definition for ‘stack’
#>    calculate_aov: no visible global function definition for ‘aov’
#>    calculate_auto_kalib: no visible binding for '<<-' assignment to
#>      ‘dir_output’
#>    calculate_auto_kalib: no visible binding for global variable
#>      ‘dir_output’
#>    calculate_auto_kalib: no visible global function definition for
#>      ‘read_nml’
#>    calculate_auto_kalib: no visible global function definition for
#>      ‘get_nml_value’
#>    calculate_auto_kalib: no visible binding for global variable
#>      ‘but_cal_si_auto’
#>    calculate_auto_kalib: no visible global function definition for
#>      ‘set_nml’
#>    calculate_auto_kalib: no visible global function definition for
#>      ‘write_nml’
#>    calculate_auto_kalib: no visible global function definition for
#>      ‘compare_to_field’
#>    calculate_auto_kalib: no visible binding for global variable
#>      ‘dir_field_temp’
#>    calculate_auto_kalib: no visible binding for global variable
#>      ‘dir_field_level’
#>    calculate_auto_kalib: no visible global function definition for
#>      ‘write.table’
#>    check_data_connection: no visible global function definition for
#>      ‘read_nml’
#>    check_data_connection: no visible global function definition for
#>      ‘get_nml_value’
#>    check_data_connection: no visible binding for '<<-' assignment to
#>      ‘button_confi’
#>    check_data_connection: no visible binding for global variable
#>    ‘butt

     ‘button_confi’
#>    check_data_connection: no visible binding for '<<-' assignment to
#>      ‘button_set_parameter’
#>    check_data_connection: no visible binding for global variable
#>      ‘button_set_parameter’
#>    check_data_connection: no visible binding for '<<-' assignment to
#>      ‘button_build’
#>    check_data_connection: no visible binding for global variable
#>      ‘button_build’
#>    check_data_connection: no visible binding for '<<-' assignment to
#>      ‘button_cal_SI_value’
#>    check_data_connection: no visible binding for global variable
#>      ‘button_cal_SI_value’
#>    check_data_connection: no visible binding for '<<-' assignment to
#>      ‘button_field_level’
#>    check_data_connection: no visible binding for global variable
#>      ‘button_field_level’
#>    check_data_connection: no visible binding for '<<-' assignment to
#>      ‘button_field_temp’
#>    check_data_connection: no visible binding for global variable
#>      ‘button_field_temp’
#>    check_data_connection: no visible binding for '<<-' assignment to
#>      ‘button_autocalib’
#>    check_data_connection: no visible binding for global variable
#>      ‘button_autocalib’
#>    check_data_connection: no visible binding for '<<-' assignment to ‘l’
#>    check_data_connection: no visible binding for '<<-' assignment to ‘k’
#>    check_data_connection: no visible binding for global variable ‘l’
#>    check_data_connection: no visible binding for global variable ‘k’
#>    check_data_connection: no visible binding for '<<-' assignment to
#>      ‘dir_meteo’
#>    check_data_connection: no visible binding for '<<-' assignment to
#>      ‘arg_meteo’
#>    check_data_connection: no visible binding for global variable
#>      ‘dir_meteo’
#>    check_data_connection: no visible binding for '<<-' assignment to
#>      ‘label_met_data’
#>    check_data_connection: no visible binding for global variable
#>      ‘label_met_data’
#>    check_data_connection: no visible binding for '<<-' assignment to
#>      ‘multi_inflow’
#>    check_data_connection: no visible binding for global variable
#>      ‘multi_inflow’
#>    check_data_connection: no visible binding for '<<-' assignment to
#>      ‘label_inflow_data’
#> check_data_connection: no visible

   check_data_connection: no visible binding for global variable
#>      ‘label_inflow_data’
#>    check_data_connection: no visible binding for '<<-' assignment to
#>      ‘arg_inflow’
#>    check_data_connection: no visible binding for '<<-' assignment to
#>      ‘dir_inflow’
#>    check_data_connection: no visible binding for global variable
#>      ‘dir_inflow’
#>    check_data_connection: no visible binding for '<<-' assignment to
#>      ‘multi_outflow’
#>    check_data_connection: no visible binding for global variable
#>      ‘multi_outflow’
#>    check_data_connection: no visible binding for '<<-' assignment to
#>      ‘label_outflow_data’
#>    check_data_connection: no visible binding for global variable
#>      ‘label_outflow_data’
#>    check_data_connection: no visible binding for '<<-' assignment to
#>      ‘dir_outflow’
#>    check_data_connection: no visible binding for global variable
#>      ‘dir_outflow’
#>    get_dataframe_Level_Lake: no visible global function definition for
#>      ‘read.csv’
#>    get_dataframe_Level_Lake: no visible global function definition for
#>      ‘na.omit’
#>    get_parameter: no visible global function definition for ‘read_nml’
#>    get_parameter: no visible global function definition for
#>      ‘get_nml_value’
#>    get_pre_list_of_default_values: no visible binding for global variable
#>      ‘workspace’
#>    get_pre_list_of_default_values: no visible global function definition
#>      for ‘read_nml’
#>    get_pre_list_of_default_values: no visible global function definition
#>      for ‘get_nml_value’
#>    glmGUI: no visible global function definition for ‘install.packages’
#>    set_cali_boundary : <anonymous>: no visible binding for '<<-'
#>      assignment to ‘boundary.env’
#>    set_cali_boundary : <anonymous>: no visible binding for global variable
#>      ‘boundary.env’
#>    set_parameter: no visible binding for '<<-' assignment to ‘cb’
#>    set_parameter: no visible binding for global variable ‘l’
#>    set_parameter : <anonymous>: no visible binding for global variable
#>      ‘List_parameter’
#>    set_parameter : <anonymous>: no visible global function definition for
#>      ‘read_nml’
#>    set_parameter : <anonymous>: no visible binding for '<<-' assignment to
#>      ‘gewaehlterwert’
#> set_paramet

   set_parameter : <anonymous>: no visible global function definition for
#>      ‘get_nml_value’
#>    set_parameter : <anonymous>: no visible binding for global variable
#>      ‘cb’
#>    set_parameter : <anonymous>: no visible binding for global variable
#>      ‘gewaehlterwert’
#>    set_parameter : <anonymous>: no visible binding for '<<-' assignment to
#>      ‘gewaehlt’
#>    set_parameter: no visible binding for '<<-' assignment to
#>      ‘button_set_parameter’
#>    set_parameter : <anonymous>: no visible binding for '<<-' assignment to
#>      ‘List_parameter_temp’
#>    set_parameter : <anonymous>: no visible binding for global variable
#>      ‘List_parameter_temp’
#>    set_parameter : <anonymous>: no visible binding for '<<-' assignment to
#>      ‘List_parameter’
#>    set_parameter : <anonymous>: no visible binding for '<<-' assignment to
#>      ‘List_values’
#>    set_parameter : <anonymous>: no visible binding for '<<-' assignment to
#>      ‘label_nml_range’
#>    set_parameter : <anonymous>: no visible binding for global variable
#>      ‘label_nml_range’
#>    set_parameter : <anonymous>: no visible global function definition for
#>      ‘set_nml’
#>    set_parameter : <anonymous>: no visible binding for global variable
#>      ‘gewaehlt’
#>    set_parameter : <anonymous>: no visible global function definition for
#>      ‘write_nml’
#>    show_write_dialog : <anonymous>: no visible binding for global variable
#>      ‘dir_field_temp’
#>    show_write_dialog : <anonymous>: no visible binding for global variable
#>      ‘dir_field_level’
#>    show_write_dialog : <anonymous>: no visible global function definition
#>      for ‘write.csv’
#>    window_input_csv_to_plot: no visible global function definition for
#>      ‘read.csv’
#>    window_input_csv_to_plot: no visible binding for '<<-' assignment to
#>      ‘list_missing_data’
#>    window_input_csv_to_plot : repair_input: no visible global function
#>      definition for ‘na.kalman’
#>    window_input_csv_to_plot : repair_input: no visible binding for global
#>      variable ‘list_missing_data’
#>    window_input_csv_to_plot : updatePlots_repair: no visible global
#>      function definition for ‘dev.set’
#> window_input_csv_to_plot : updatePlots_repair: no vi

   window_input_csv_to_plot : updatePlots_repair: no visible global
#>      function definition for ‘plot’
#>    window_input_csv_to_plot : updatePlots_repair: no visible global
#>      function definition for ‘na.omit’
#>    window_input_csv_to_plot : updatePlots_repair: no visible binding for
#>      global variable ‘list_missing_data’
#>    window_input_csv_to_plot : updatePlots_repair: no visible global
#>      function definition for ‘points’
#>    window_input_csv_to_plot : updatePlots_repair: no visible global
#>      function definition for ‘legend’
#>    window_input_csv_to_plot: no visible global function definition for
#>      ‘dev.cur’
#>    window_input_csv_to_plot : <anonymous>: no visible binding for '<<-'
#>      assignment to ‘list_missing_data’
#>    window_input_csv_to_plot : updatePlots: no visible global function
#>      definition for ‘dev.set’
#>    window_input_csv_to_plot : updatePlots: no visible global function
#>      definition for ‘plot’
#>    window_input_csv_to_plot : updatePlots: no visible global function
#>      definition for ‘na.omit’
#>    window_input_csv_to_plot : updatePlots: no visible binding for global
#>      variable ‘list_missing_data’
#>    window_input_csv_to_plot : updatePlots: no visible global function
#>      definition for ‘points’
#>    window_input_csv_to_plot : check_null: no visible binding for '<<-'
#>      assignment to ‘list_missing_data’
#>    window_input_csv_to_plot : check_null: no visible binding for global
#>      variable ‘list_missing_data’
#>    window_input_csv_to_plot : check_null: no visible binding for '<<-'
#>      assignment to ‘list_0_data’
#>    window_input_csv_to_plot : check_null: no visible global function
#>      definition for ‘na.omit’
#>    window_input_csv_to_plot : check_null: no visible binding for global
#>      variable ‘list_0_data’
#>    window_input_csv_to_plot2: no visible global function definition for
#>      ‘read.csv’
#>    window_input_csv_to_plot2: no visible binding for global variable
#>      ‘dir_field_temp’
#>    window_input_csv_to_plot2: no visible binding for '<<-' assignment to
#>      ‘list_missing_data’
#>    window_input_csv_to_plot2 : check_null: no visible binding for '<<-'
#>      assignment to ‘list_missing_data’
#> window_input_csv_to_plot2 : check_

   window_input_csv_to_plot2 : check_null: no visible binding for global
#>      variable ‘list_missing_data’
#>    window_input_csv_to_plot2: no visible binding for global variable
#>      ‘dir_field_level’
#>    window_input_csv_to_plot2: no visible global function definition for
#>      ‘dev.cur’
#>    window_input_csv_to_plot2 : <anonymous>: no visible binding for '<<-'
#>      assignment to ‘list_missing_data’
#>    window_input_csv_to_plot2 : updatePlots: no visible global function
#>      definition for ‘dev.set’
#>    window_input_csv_to_plot2 : updatePlots: no visible global function
#>      definition for ‘plot’
#>    window_input_csv_to_plot2 : updatePlots: no visible global function
#>      definition for ‘na.omit’
#>    window_output_csv_to_plot: no visible global function definition for
#>      ‘read.csv’
#>    window_output_csv_to_plot: no visible global function definition for
#>      ‘dev.cur’
#>    window_output_csv_to_plot : updatePlots: no visible global function
#>      definition for ‘dev.set’
#>    window_output_csv_to_plot : updatePlots: no visible global function
#>      definition for ‘plot’
#>    window_output_csv_to_plot : updatePlots: no visible global function
#>      definition for ‘lines’
#>    window_output_csv_to_plot : updatePlots: no visible global function
#>      definition for ‘lowess’
#>    window_plot_RMSE: no visible binding for global variable ‘List_values’
#>    window_plot_RMSE: no visible binding for global variable
#>      ‘List_parameter’
#>    window_plot_RMSE: no visible global function definition for ‘plot’
#>    window_plot_RMSE: no visible global function definition for ‘lines’
#>    window_plot_RMSE: no visible global function definition for
#>      ‘shapiro.test’
#>    window_plot_RMSE: no visible global function definition for ‘points’
#>    window_plot_dataframe_Level_Lake: no visible binding for '<<-'
#>      assignment to ‘dir_output’
#>    window_plot_dataframe_Level_Lake: no visible global function definition
#>      for ‘read_nml’
#>    window_plot_dataframe_Level_Lake: no visible binding for global
#>      variable ‘dir_output’
#>    window_plot_dataframe_Level_Lake: no visible global function definition
#>      for ‘get_nml_value’
#> window_plot_dataframe_Level_Lake: no visible globa

   window_plot_dataframe_Level_Lake: no visible global function definition
#>      for ‘read.csv’
#>    window_plot_dataframe_Level_Lake: no visible global function definition
#>      for ‘plot’
#>    window_plot_dataframe_Level_Lake: no visible global function definition
#>      for ‘lines’
#>    window_plot_dataframe_Level_Lake: no visible global function definition
#>      for ‘legend’
#>    window_plot_dataframe_Level_Lake: no visible global function definition
#>      for ‘strwidth’
#>    window_plot_list_graph: no visible global function definition for ‘par’
#>    window_plot_list_graph: no visible global function definition for
#>      ‘n2mfrow’
#>    window_plot_list_graph: no visible global function definition for
#>      ‘plot’
#>    window_plot_list_graph: no visible global function definition for
#>      ‘points’
#>    window_plot_list_graph: no visible global function definition for
#>      ‘lines’
#>    window_plot_list_temp: no visible global function definition for ‘par’
#>    window_plot_list_temp: no visible global function definition for
#>      ‘n2mfrow’
#>    window_plot_list_temp: no visible global function definition for ‘plot’
#>    window_plot_list_temp: no visible global function definition for
#>      ‘points’
#>    window_plot_list_temp: no visible global function definition for
#>      ‘lines’
#>    window_plot_model_output: no visible global function definition for
#>      ‘sim_vars’
#>    window_plot_model_output: no visible global function definition for
#>      ‘dev.cur’
#>    window_plot_model_output : updatePlots: no visible global function
#>      definition for ‘dev.set’
#>    window_plot_model_output : updatePlots: no visible global function
#>      definition for ‘plot_var’
#>    window_plot_multi_histo: no visible global function definition for
#>      ‘par’
#>    window_plot_multi_histo: no visible global function definition for
#>      ‘shapiro.test’
#>    window_plot_multi_histo: no visible global function definition for
#>      ‘hist’
#>    window_plot_multi_histo: no visible binding for global variable
#>      ‘List_values’
#>    window_plot_temp_compare: no visible global function definition for
#>      ‘dev.cur’
#>    window_plot_temp_compare: no visible global function definition for
#>      ‘par’
#> window_plot_temp_compare: no visible global

   window_plot_temp_compare: no visible global function definition for
#>      ‘get_var’
#>    window_plot_temp_compare: no visible global function definition for
#>      ‘get.offsets’
#>    window_plot_temp_compare: no visible global function definition for
#>      ‘resample_to_field’
#>    window_plot_temp_compare: no visible global function definition for
#>      ‘resample_sim’
#>    window_plot_temp_compare: no visible global function definition for
#>      ‘interp’
#>    window_plot_temp_compare : gen_default_fig: no visible global function
#>      definition for ‘valid_fig_path’
#>    window_plot_temp_compare : gen_default_fig: no visible global function
#>      definition for ‘png’
#>    window_plot_temp_compare : gen_default_fig: no visible global function
#>      definition for ‘par’
#>    window_plot_temp_compare : .stacked_layout: no visible global function
#>      definition for ‘.simple_layout’
#>    window_plot_temp_compare : colbar_layout: no visible global function
#>      definition for ‘layout’
#>    window_plot_temp_compare : .plot_df_heatmap: no visible global function
#>      definition for ‘colorRampPalette’
#>    window_plot_temp_compare : .plot_df_heatmap: no visible global function
#>      definition for ‘head’
#>    window_plot_temp_compare : .plot_df_heatmap: no visible global function
#>      definition for ‘.filled.contour’
#>    window_plot_temp_compare : .plot_df_heatmap_diff: no visible global
#>      function definition for ‘colorRampPalette’
#>    window_plot_temp_compare : .plot_df_heatmap_diff: no visible global
#>      function definition for ‘head’
#>    window_plot_temp_compare : .plot_df_heatmap_diff: no visible global
#>      function definition for ‘.filled.contour’
#>    window_plot_temp_compare : plot_layout: no visible global function
#>      definition for ‘plot’
#>    window_plot_temp_compare : axis_layout: no visible global function
#>      definition for ‘axis’
#>    window_plot_temp_compare : axis_layout: no visible global function
#>      definition for ‘par’
#>    window_plot_temp_compare : color_key: no visible global function
#>      definition for ‘plot’
#>    window_plot_temp_compare : color_key: no visible global function
#>      definition for ‘par’
#> window_plot_temp_compare : color_key: no visibl

   window_plot_temp_compare : color_key: no visible global function
#>      definition for ‘axis’
#>    window_plot_temp_compare : color_key: no visible global function
#>      definition for ‘polygon’
#>    window_plot_temp_compare : color_key: no visible global function
#>      definition for ‘text’
#>    window_plot_temp_compare : color_key_diff: no visible global function
#>      definition for ‘plot’
#>    window_plot_temp_compare : color_key_diff: no visible global function
#>      definition for ‘par’
#>    window_plot_temp_compare : color_key_diff: no visible global function
#>      definition for ‘axis’
#>    window_plot_temp_compare : color_key_diff: no visible global function
#>      definition for ‘polygon’
#>    window_plot_temp_compare : color_key_diff: no visible global function
#>      definition for ‘text’
#>    window_plot_temp_compare: no visible global function definition for
#>      ‘compare_to_field’
#>    window_plot_temp_compare: no visible global function definition for
#>      ‘dev.copy’
#>    window_plot_temp_compare: no visible binding for global variable ‘pdf’
#>    window_plot_temp_compare: no visible global function definition for
#>      ‘dev.off’
#>    window_plot_temp_compare: no visible global function definition for
#>      ‘points’
#>    window_plot_temp_compare: no visible global function definition for
#>      ‘text’
#>    window_select_SI_calculation : <anonymous>: no visible binding for
#>      global variable ‘dir_field_temp’
#>    window_select_SI_calculation : <anonymous>: no visible binding for
#>      global variable ‘dir_field_level’
#>    window_select_SI_calculation : <anonymous>: no visible binding for
#>      global variable ‘label_status_SI_calculation’
#>    window_select_SI_calculation: no visible binding for '<<-' assignment
#>      to ‘label_status_SI_calculation’
#>    window_select_auto_kalib : <anonymous>: no visible binding for global
#>      variable ‘boundary.env’
#>    window_select_auto_kalib: no visible binding for '<<-' assignment to
#>      ‘but_cal_si_auto’
#>    window_select_auto_kalib : <anonymous>: no visible binding for global
#>      variable ‘dir_field_temp’
#>    window_select_auto_kalib : <anonymous>: no visible binding for global
#>      variable ‘dir_field_level’
#> window_select_auto_ka

   window_select_auto_kalib : <anonymous>: no visible binding for global
#>      variable ‘label_status_CAL_calculation’
#>    window_select_auto_kalib: no visible binding for '<<-' assignment to
#>      ‘label_status_CAL_calculation’
#>    windows_main_menu: no visible binding for '<<-' assignment to
#>      ‘workspace’
#>    windows_main_menu: no visible binding for '<<-' assignment to
#>      ‘arg_meteo’
#>    windows_main_menu: no visible binding for '<<-' assignment to
#>      ‘multi_inflow’
#>    windows_main_menu: no visible binding for '<<-' assignment to
#>      ‘multi_outflow’
#>    windows_main_menu: no visible binding for '<<-' assignment to
#>      ‘arg_inflow’
#>    windows_main_menu: no visible binding for '<<-' assignment to
#>      ‘arg_outflow’
#>    windows_main_menu: no visible binding for '<<-' assignment to
#>      ‘dir_field_temp’
#>    windows_main_menu: no visible binding for '<<-' assignment to
#>      ‘dir_field_level’
#>    windows_main_menu: no visible binding for '<<-' assignment to
#>      ‘List_parameter’
#>    windows_main_menu: no visible binding for '<<-' assignment to
#>      ‘List_values’
#>    windows_main_menu: no visible binding for '<<-' assignment to
#>      ‘dfList_Temp’
#>    windows_main_menu: no visible binding for '<<-' assignment to
#>      ‘dfList_Level’
#>    windows_main_menu: no visible binding for '<<-' assignment to
#>      ‘label_workspace’
#>    windows_main_menu: no visible binding for '<<-' assignment to
#>      ‘label_workspace_project’
#>    windows_main_menu: no visible binding for '<<-' assignment to
#>      ‘button_new_workspace’
#>    windows_main_menu : <anonymous>: no visible binding for '<<-'
#>      assignment to ‘workspace’
#>    windows_main_menu : <anonymous>: no visible global function definition
#>      for ‘read_nml’
#>    windows_main_menu : <anonymous>: no visible global function definition
#>      for ‘write_nml’
#>    windows_main_menu : <anonymous>: no visible binding for global variable
#>      ‘workspace’
#>    windows_main_menu: no visible binding for '<<-' assignment to
#>      ‘button_workspace’
#>    windows_main_menu : <anonymous> : <anonymous>: no visible global
#>      function definition for ‘read_nml’
#>    windows_main_menu : <anonymous> : <anonymous>: no visible global
#>

     function definition for ‘write_nml’
#>    windows_main_menu : <anonymous> : <anonymous>: no visible binding for
#>      global variable ‘workspace’
#>    windows_main_menu: no visible binding for '<<-' assignment to
#>      ‘label_met_data’
#>    windows_main_menu : <anonymous>: no visible binding for global variable
#>      ‘dir_meteo’
#>    windows_main_menu : <anonymous>: no visible binding for global variable
#>      ‘arg_meteo’
#>    windows_main_menu: no visible binding for '<<-' assignment to
#>      ‘label_inflow_data’
#>    windows_main_menu : <anonymous>: no visible binding for global variable
#>      ‘multi_inflow’
#>    windows_main_menu : <anonymous>: no visible binding for global variable
#>      ‘dir_inflow’
#>    windows_main_menu : <anonymous>: no visible binding for global variable
#>      ‘arg_inflow’
#>    windows_main_menu: no visible binding for '<<-' assignment to
#>      ‘label_outflow_data’
#>    windows_main_menu : <anonymous>: no visible binding for global variable
#>      ‘multi_outflow’
#>    windows_main_menu : <anonymous>: no visible binding for global variable
#>      ‘dir_outflow’
#>    windows_main_menu : <anonymous>: no visible binding for global variable
#>      ‘arg_outflow’
#>    windows_main_menu: no visible binding for '<<-' assignment to
#>      ‘label_nml_status’
#>    windows_main_menu: no visible binding for '<<-' assignment to
#>      ‘label_nml_range’
#>    windows_main_menu: no visible binding for '<<-' assignment to
#>      ‘button_field_temp’
#>    windows_main_menu : <anonymous>: no visible binding for '<<-'
#>      assignment to ‘dir_field_temp’
#>    windows_main_menu : <anonymous>: no visible binding for global variable
#>      ‘dir_field_temp’
#>    windows_main_menu: no visible binding for global variable
#>      ‘button_field_temp’
#>    windows_main_menu: no visible binding for '<<-' assignment to
#>      ‘label_field_level’
#>    windows_main_menu: no visible binding for '<<-' assignment to
#>      ‘button_field_level’
#>    windows_main_menu : <anonymous>: no visible binding for '<<-'
#>      assignment to ‘dir_field_level’
#>    windows_main_menu : <anonymous>: no visible binding for global variable
#>      ‘dir_field_level’
#> windows_main_menu: no visible binding f

   windows_main_menu: no visible binding for global variable
#>      ‘button_field_level’
#>    windows_main_menu: no visible binding for '<<-' assignment to
#>      ‘label_status_build’
#>    windows_main_menu : <anonymous>: no visible global function definition
#>      for ‘get_nml_value’
#>    Undefined global functions or variables:
#>      .filled.contour .simple_layout List_parameter List_parameter_temp
#>      List_values aov arg_inflow arg_meteo arg_outflow axis barplot
#>      boundary.env but_cal_si_auto button_autocalib button_build
#>      button_cal_SI_value button_confi button_field_level button_field_temp
#>      button_set_parameter cb checkbox_Level_plot checkbox_Level_rmse
#>      checkbox_Temp_plot checkbox_Temp_plot2 checkbox_Temp_plot3
#>      checkbox_Temp_plot4 checkbox_Temp_rmse colorRampPalette
#>      compare_to_field dev.copy dev.cur dev.off dev.set dir_field_level
#>      dir_field_temp dir_inflow dir_meteo dir_outflow dir_output
#>      get.offsets get_nml_value get_var gewaehlt gewaehlterwert head hist
#>      install.packages interp k l label_inflow_data label_met_data
#>      label_nml_range label_outflow_data label_status_CAL_calculation
#>      label_status_SI_calculation label_status_build layout legend lines
#>      list_0_data list_missing_data lowess multi_inflow multi_outflow
#>      n2mfrow na.kalman na.omit par pdf plot plot_var png points polygon
#>      read.csv read_nml resample_sim resample_to_field set_nml shapiro.test
#>      sim_vars stack strwidth text valid_fig_path workspace write.csv
#>      write.table write_nml
#>    Consider adding
#>      importFrom("grDevices", "colorRampPalette", "dev.copy", "dev.cur",
#>                 "dev.off", "dev.set", "n2mfrow", "pdf", "png")
#>      importFrom("graphics", ".filled.contour", "axis", "barplot", "hist",
#>                 "layout", "legend", "lines", "par", "plot", "points",
#>                 "polygon", "strwidth", "text")
#>      importFrom("stats", "aov", "lowess", "na.omit", "shapiro.test")
#>      importFrom("utils", "head", "install.packages", "read.csv", "stack",
#>                 "write.csv", "write.table")
#>    to your NAMESPACE file.
#>    checking Rd files ...

✔  checking Rd files
#>

   checking Rd metadata ...

✔  checking Rd metadata
#>

   checking Rd line widths ...

✔  checking Rd line widths
#>

   checking Rd cross-references ...

✔  checking Rd cross-references
#>

   checking for missing documentation entries ...

W  checking for missing documentation entries (552ms)
#>    Undocumented code objects:
#>      ‘glmGUI’
#>    Undocumented data sets:
#>      ‘boundary.env’
#>

   All user-level objects in a package should have documentation entries.
#>    See chapter ‘Writing R documentation files’ in the ‘Writing R
#>    Extensions’ manual.
#>    checking for code/documentation mismatches ...

✔  checking for code/documentation mismatches (1.6s)
#>

   checking Rd \usage sections ...

W  checking Rd \usage sections
#>    Undocumented arguments in documentation object 'windows_main_menu'
#>      ‘version’
#>    
#>

   Functions with \usage entries need to have the appropriate \alias
#>    entries, and all their arguments documented.
#>    The \usage entries must correspond to syntactically valid R code.
#>    See chapter ‘Writing R documentation files’ in the ‘Writing R
#>    Extensions’ manual.
#>

   checking Rd contents ...

✔  checking Rd contents (1.2s)
#>

   checking for unstated dependencies in examples ...

✔  checking for unstated dependencies in examples
#>

✔  checking contents of ‘data’ directory
#>    checking data for non-ASCII characters ...

✔  checking data for non-ASCII characters
#>

   checking data for ASCII and uncompressed saves ...

✔  checking data for ASCII and uncompressed saves
#>

   checking examples ...

─  checking examples ... NONE
#>


#>    See
#>      ‘/tmp/RtmpnENyaj/glmgui.Rcheck/00check.log’
#>    for details.
#>    
#>    
#>


── R CMD check results ──────────────────────────────────── glmgui 1.0 ────
#> Duration: 23.7s
#> 
#> ❯ checking dependencies in R code ... WARNING
#>   'library' or 'require' calls not declared from:
#>     ‘GLMr’ ‘glmtools’
#>   'library' or 'require' calls in package code:
#>     ‘GLMr’ ‘glmtools’
#>     Please use :: or requireNamespace() instead.
#>     See section 'Suggested packages' in the 'Writing R Extensions' manual.
#> 
#> ❯ checking for missing documentation entries ... WARNING
#>   Undocumented code objects:
#>     ‘glmGUI’
#>   Undocumented data sets:
#>     ‘boundary.env’
#>   All user-level objects in a package should have documentation entries.
#>   See chapter ‘Writing R documentation files’ in the ‘Writing R
#>   Extensions’ manual.
#> 
#> ❯ checking Rd \usage sections ... WARNING
#>   Undocumented arguments in documentation object 'windows_main_menu'
#>     ‘version’
#>   
#>   Functions with \usage entries need to have the appropriate \alias
#>   entries, and all their arguments documented.
#>   The \usage entries must correspond to syntactically valid R code.
#>   See chapter ‘Writing R documentation files’ in the ‘Writing R
#>   Extensions’ manual.
#> 
#> ❯ checking installed package size ... NOTE
#>     installed size is 21.6Mb
#>     sub-directories of 1Mb or more:
#>       extdata  21.3Mb
#> 
#> ❯ checking top-level files ... NOTE
#>   Non-standard file/directory found at top level:
#>     ‘images’
#> 
#> ❯ checking R code for possible problems ... NOTE
#>   build_model: no visible binding for '<<-' assignment to
#>     ‘label_status_build’
#>   build_model: no visible binding for global variable
#>     ‘label_status_build’
#>   build_model: no visible binding for global variable ‘List_values’
#>   build_model: no visible binding for global variable ‘button_build’
#>   build_model: no visible binding for '<<-' assignment to ‘dir_output’
#>   build_model: no visible binding for global variable ‘dir_output’
#>   build_model: no visible global function definition for ‘read_nml’
#>   build_model: no visible global function definition for ‘get_nml_value’
#>   build_model: no visible global function definition for ‘set_nml’
#>   build_model: no visible binding for global variable ‘List_parameter’
#>   build_model: no visible global function definition for ‘write_nml’
#>   build_model: no visible binding for global variable
#>     ‘checkbox_Level_plot’
#>   build_model: no visible binding for global variable
#>     ‘checkbox_Level_rmse’
#>   build_model: no visible binding for global variable ‘dir_field_level’
#>   build_model: no visible binding for global variable
#>     ‘checkbox_Temp_plot’
#>   build_model: no visible binding for global variable
#>     ‘checkbox_Temp_rmse’
#>   build_model: no visible global function definition for
#>     ‘compare_to_field’
#>   build_model: no visible binding for global variable ‘dir_field_temp’
#>   build_model: no visible global function definition for ‘dev.cur’
#>   build_model: no visible global function definition for ‘plot’
#>   build_model: no visible binding for global variable
#>     ‘checkbox_Temp_plot2’
#>   build_model: no visible binding for global variable
#>     ‘checkbox_Temp_plot3’
#>   build_model: no visible binding for global variable
#>     ‘checkbox_Temp_plot4’
#>   build_model: no visible binding for '<<-' assignment to ‘button_build’
#>   calculate_SI_value: no visible binding for '<<-' assignment to
#>     ‘dir_output’
#>   calculate_SI_value: no visible binding for global variable ‘dir_output’
#>   calculate_SI_value: no visible global function definition for
#>     ‘read_nml’
#>   calculate_SI_value: no visible global function definition for
#>     ‘get_nml_value’
#>   calculate_SI_value: no visible global function definition for ‘set_nml’
#>   calculate_SI_value: no visible global function definition for
#>     ‘write_nml’
#>   calculate_SI_value: no visible global function definition for
#>     ‘compare_to_field’
#>   calculate_SI_value: no visible binding for global variable
#>     ‘dir_field_temp’
#>   calculate_SI_value: no visible binding for global variable
#>     ‘dir_field_level’
#>   calculate_SI_value: no visible global function definition for
#>     ‘write.csv’
#>   calculate_SI_value: no visible global function definition for ‘dev.cur’
#>   calculate_SI_value: no visible global function definition for ‘par’
#>   calculate_SI_value: no visible global function definition for ‘barplot’
#>   calculate_aov: no visible global function definition for ‘stack’
#>   calculate_aov: no visible global function definition for ‘aov’
#>   calculate_auto_kalib: no visible binding for '<<-' assignment to
#>     ‘dir_output’
#>   calculate_auto_kalib: no visible binding for global variable
#>     ‘dir_output’
#>   calculate_auto_kalib: no visible global function definition for
#>     ‘read_nml’
#>   calculate_auto_kalib: no visible global function definition for
#>     ‘get_nml_value’
#>   calculate_auto_kalib: no visible binding for global variable
#>     ‘but_cal_si_auto’
#>   calculate_auto_kalib: no visible global function definition for
#>     ‘set_nml’
#>   calculate_auto_kalib: no visible global function definition for
#>     ‘write_nml’
#>   calculate_auto_kalib: no visible global function definition for
#>     ‘compare_to_field’
#>   calculate_auto_kalib: no visible binding for global variable
#>     ‘dir_field_temp’
#>   calculate_auto_kalib: no visible binding for global variable
#>     ‘dir_field_level’
#>   calculate_auto_kalib: no visible global function definition for
#>     ‘write.table’
#>   check_data_connection: no visible global function definition for
#>     ‘read_nml’
#>   check_data_connection: no visible global function definition for
#>     ‘get_nml_value’
#>   check_data_connection: no visible binding for '<<-' assignment to
#>     ‘button_confi’
#>   check_data_connection: no visible binding for global variable
#>     ‘button_confi’
#>   check_data_connection: no visible binding for '<<-' assignment to
#>     ‘button_set_parameter’
#>   check_data_connection: no visible binding for global variable
#>     ‘button_set_parameter’
#>   check_data_connection: no visible binding for '<<-' assignment to
#>     ‘button_build’
#>   check_data_connection: no visible binding for global variable
#>     ‘button_build’
#>   check_data_connection: no visible binding for '<<-' assignment to
#>     ‘button_cal_SI_value’
#>   check_data_connection: no visible binding for global variable
#>     ‘button_cal_SI_value’
#>   check_data_connection: no visible binding for '<<-' assignment to
#>     ‘button_field_level’
#>   check_data_connection: no visible binding for global variable
#>     ‘button_field_level’
#>   check_data_connection: no visible binding for '<<-' assignment to
#>     ‘button_field_temp’
#>   check_data_connection: no visible binding for global variable
#>     ‘button_field_temp’
#>   check_data_connection: no visible binding for '<<-' assignment to
#>     ‘button_autocalib’
#>   check_data_connection: no visible binding for global variable
#>     ‘button_autocalib’
#>   check_data_connection: no visible binding for '<<-' assignment to ‘l’
#>   check_data_connection: no visible binding for '<<-' assignment to ‘k’
#>   check_data_connection: no visible binding for global variable ‘l’
#>   check_data_connection: no visible binding for global variable ‘k’
#>   check_data_connection: no visible binding for '<<-' assignment to
#>     ‘dir_meteo’
#>   check_data_connection: no visible binding for '<<-' assignment to
#>     ‘arg_meteo’
#>   check_data_connection: no visible binding for global variable
#>     ‘dir_meteo’
#>   check_data_connection: no visible binding for '<<-' assignment to
#>     ‘label_met_data’
#>   check_data_connection: no visible binding for global variable
#>     ‘label_met_data’
#>   check_data_connection: no visible binding for '<<-' assignment to
#>     ‘multi_inflow’
#>   check_data_connection: no visible binding for global variable
#>     ‘multi_inflow’
#>   check_data_connection: no visible binding for '<<-' assignment to
#>     ‘label_inflow_data’
#>   check_data_connection: no visible binding for global variable
#>     ‘label_inflow_data’
#>   check_data_connection: no visible binding for '<<-' assignment to
#>     ‘arg_inflow’
#>   check_data_connection: no visible binding for '<<-' assignment to
#>     ‘dir_inflow’
#>   check_data_connection: no visible binding for global variable
#>     ‘dir_inflow’
#>   check_data_connection: no visible binding for '<<-' assignment to
#>     ‘multi_outflow’
#>   check_data_connection: no visible binding for global variable
#>     ‘multi_outflow’
#>   check_data_connection: no visible binding for '<<-' assignment to
#>     ‘label_outflow_data’
#>   check_data_connection: no visible binding for global variable
#>     ‘label_outflow_data’
#>   check_data_connection: no visible binding for '<<-' assignment to
#>     ‘dir_outflow’
#>   check_data_connection: no visible binding for global variable
#>     ‘dir_outflow’
#>   get_dataframe_Level_Lake: no visible global function definition for
#>     ‘read.csv’
#>   get_dataframe_Level_Lake: no visible global function definition for
#>     ‘na.omit’
#>   get_parameter: no visible global function definition for ‘read_nml’
#>   get_parameter: no visible global function definition for
#>     ‘get_nml_value’
#>   get_pre_list_of_default_values: no visible binding for global variable
#>     ‘workspace’
#>   get_pre_list_of_default_values: no visible global function definition
#>     for ‘read_nml’
#>   get_pre_list_of_default_values: no visible global function definition
#>     for ‘get_nml_value’
#>   glmGUI: no visible global function definition for ‘install.packages’
#>   set_cali_boundary : <anonymous>: no visible binding for '<<-'
#>     assignment to ‘boundary.env’
#>   set_cali_boundary : <anonymous>: no visible binding for global variable
#>     ‘boundary.env’
#>   set_parameter: no visible binding for '<<-' assignment to ‘cb’
#>   set_parameter: no visible binding for global variable ‘l’
#>   set_parameter : <anonymous>: no visible binding for global variable
#>     ‘List_parameter’
#>   set_parameter : <anonymous>: no visible global function definition for
#>     ‘read_nml’
#>   set_parameter : <anonymous>: no visible binding for '<<-' assignment to
#>     ‘gewaehlterwert’
#>   set_parameter : <anonymous>: no visible global function definition for
#>     ‘get_nml_value’
#>   set_parameter : <anonymous>: no visible binding for global variable
#>     ‘cb’
#>   set_parameter : <anonymous>: no visible binding for global variable
#>     ‘gewaehlterwert’
#>   set_parameter : <anonymous>: no visible binding for '<<-' assignment to
#>     ‘gewaehlt’
#>   set_parameter: no visible binding for '<<-' assignment to
#>     ‘button_set_parameter’
#>   set_parameter : <anonymous>: no visible binding for '<<-' assignment to
#>     ‘List_parameter_temp’
#>   set_parameter : <anonymous>: no visible binding for global variable
#>     ‘List_parameter_temp’
#>   set_parameter : <anonymous>: no visible binding for '<<-' assignment to
#>     ‘List_parameter’
#>   set_parameter : <anonymous>: no visible binding for '<<-' assignment to
#>     ‘List_values’
#>   set_parameter : <anonymous>: no visible binding for '<<-' assignment to
#>     ‘label_nml_range’
#>   set_parameter : <anonymous>: no visible binding for global variable
#>     ‘label_nml_range’
#>   set_parameter : <anonymous>: no visible global function definition for
#>     ‘set_nml’
#>   set_parameter : <anonymous>: no visible binding for global variable
#>     ‘gewaehlt’
#>   set_parameter : <anonymous>: no visible global function definition for
#>     ‘write_nml’
#>   show_write_dialog : <anonymous>: no visible binding for global variable
#>     ‘dir_field_temp’
#>   show_write_dialog : <anonymous>: no visible binding for global variable
#>     ‘dir_field_level’
#>   show_write_dialog : <anonymous>: no visible global function definition
#>     for ‘write.csv’
#>   window_input_csv_to_plot: no visible global function definition for
#>     ‘read.csv’
#>   window_input_csv_to_plot: no visible binding for '<<-' assignment to
#>     ‘list_missing_data’
#>   window_input_csv_to_plot : repair_input: no visible global function
#>     definition for ‘na.kalman’
#>   window_input_csv_to_plot : repair_input: no visible binding for global
#>     variable ‘list_missing_data’
#>   window_input_csv_to_plot : updatePlots_repair: no visible global
#>     function definition for ‘dev.set’
#>   window_input_csv_to_plot : updatePlots_repair: no visible global
#>     function definition for ‘plot’
#>   window_input_csv_to_plot : updatePlots_repair: no visible global
#>     function definition for ‘na.omit’
#>   window_input_csv_to_plot : updatePlots_repair: no visible binding for
#>     global variable ‘list_missing_data’
#>   window_input_csv_to_plot : updatePlots_repair: no visible global
#>     function definition for ‘points’
#>   window_input_csv_to_plot : updatePlots_repair: no visible global
#>     function definition for ‘legend’
#>   window_input_csv_to_plot: no visible global function definition for
#>     ‘dev.cur’
#>   window_input_csv_to_plot : <anonymous>: no visible binding for '<<-'
#>     assignment to ‘list_missing_data’
#>   window_input_csv_to_plot : updatePlots: no visible global function
#>     definition for ‘dev.set’
#>   window_input_csv_to_plot : updatePlots: no visible global function
#>     definition for ‘plot’
#>   window_input_csv_to_plot : updatePlots: no visible global function
#>     definition for ‘na.omit’
#>   window_input_csv_to_plot : updatePlots: no visible binding for global
#>     variable ‘list_missing_data’
#>   window_input_csv_to_plot : updatePlots: no visible global function
#>     definition for ‘points’
#>   window_input_csv_to_plot : check_null: no visible binding for '<<-'
#>     assignment to ‘list_missing_data’
#>   window_input_csv_to_plot : check_null: no visible binding for global
#>     variable ‘list_missing_data’
#>   window_input_csv_to_plot : check_null: no visible binding for '<<-'
#>     assignment to ‘list_0_data’
#>   window_input_csv_to_plot : check_null: no visible global function
#>     definition for ‘na.omit’
#>   window_input_csv_to_plot : check_null: no visible binding for global
#>     variable ‘list_0_data’
#>   window_input_csv_to_plot2: no visible global function definition for
#>     ‘read.csv’
#>   window_input_csv_to_plot2: no visible binding for global variable
#>     ‘dir_field_temp’
#>   window_input_csv_to_plot2: no visible binding for '<<-' assignment to
#>     ‘list_missing_data’
#>   window_input_csv_to_plot2 : check_null: no visible binding for '<<-'
#>     assignment to ‘list_missing_data’
#>   window_input_csv_to_plot2 : check_null: no visible binding for global
#>     variable ‘list_missing_data’
#>   window_input_csv_to_plot2: no visible binding for global variable
#>     ‘dir_field_level’
#>   window_input_csv_to_plot2: no visible global function definition for
#>     ‘dev.cur’
#>   window_input_csv_to_plot2 : <anonymous>: no visible binding for '<<-'
#>     assignment to ‘list_missing_data’
#>   window_input_csv_to_plot2 : updatePlots: no visible global function
#>     definition for ‘dev.set’
#>   window_input_csv_to_plot2 : updatePlots: no visible global function
#>     definition for ‘plot’
#>   window_input_csv_to_plot2 : updatePlots: no visible global function
#>     definition for ‘na.omit’
#>   window_output_csv_to_plot: no visible global function definition for
#>     ‘read.csv’
#>   window_output_csv_to_plot: no visible global function definition for
#>     ‘dev.cur’
#>   window_output_csv_to_plot : updatePlots: no visible global function
#>     definition for ‘dev.set’
#>   window_output_csv_to_plot : updatePlots: no visible global function
#>     definition for ‘plot’
#>   window_output_csv_to_plot : updatePlots: no visible global function
#>     definition for ‘lines’
#>   window_output_csv_to_plot : updatePlots: no visible global function
#>     definition for ‘lowess’
#>   window_plot_RMSE: no visible binding for global variable ‘List_values’
#>   window_plot_RMSE: no visible binding for global variable
#>     ‘List_parameter’
#>   window_plot_RMSE: no visible global function definition for ‘plot’
#>   window_plot_RMSE: no visible global function definition for ‘lines’
#>   window_plot_RMSE: no visible global function definition for
#>     ‘shapiro.test’
#>   window_plot_RMSE: no visible global function definition for ‘points’
#>   window_plot_dataframe_Level_Lake: no visible binding for '<<-'
#>     assignment to ‘dir_output’
#>   window_plot_dataframe_Level_Lake: no visible global function definition
#>     for ‘read_nml’
#>   window_plot_dataframe_Level_Lake: no visible binding for global
#>     variable ‘dir_output’
#>   window_plot_dataframe_Level_Lake: no visible global function definition
#>     for ‘get_nml_value’
#>   window_plot_dataframe_Level_Lake: no visible global function definition
#>     for ‘read.csv’
#>   window_plot_dataframe_Level_Lake: no visible global function definition
#>     for ‘plot’
#>   window_plot_dataframe_Level_Lake: no visible global function definition
#>     for ‘lines’
#>   window_plot_dataframe_Level_Lake: no visible global function definition
#>     for ‘legend’
#>   window_plot_dataframe_Level_Lake: no visible global function definition
#>     for ‘strwidth’
#>   window_plot_list_graph: no visible global function definition for ‘par’
#>   window_plot_list_graph: no visible global function definition for
#>     ‘n2mfrow’
#>   window_plot_list_graph: no visible global function definition for
#>     ‘plot’
#>   window_plot_list_graph: no visible global function definition for
#>     ‘points’
#>   window_plot_list_graph: no visible global function definition for
#>     ‘lines’
#>   window_plot_list_temp: no visible global function definition for ‘par’
#>   window_plot_list_temp: no visible global function definition for
#>     ‘n2mfrow’
#>   window_plot_list_temp: no visible global function definition for ‘plot’
#>   window_plot_list_temp: no visible global function definition for
#>     ‘points’
#>   window_plot_list_temp: no visible global function definition for
#>     ‘lines’
#>   window_plot_model_output: no visible global function definition for
#>     ‘sim_vars’
#>   window_plot_model_output: no visible global function definition for
#>     ‘dev.cur’
#>   window_plot_model_output : updatePlots: no visible global function
#>     definition for ‘dev.set’
#>   window_plot_model_output : updatePlots: no visible global function
#>     definition for ‘plot_var’
#>   window_plot_multi_histo: no visible global function definition for
#>     ‘par’
#>   window_plot_multi_histo: no visible global function definition for
#>     ‘shapiro.test’
#>   window_plot_multi_histo: no visible global function definition for
#>     ‘hist’
#>   window_plot_multi_histo: no visible binding for global variable
#>     ‘List_values’
#>   window_plot_temp_compare: no visible global function definition for
#>     ‘dev.cur’
#>   window_plot_temp_compare: no visible global function definition for
#>     ‘par’
#>   window_plot_temp_compare: no visible global function definition for
#>     ‘get_var’
#>   window_plot_temp_compare: no visible global function definition for
#>     ‘get.offsets’
#>   window_plot_temp_compare: no visible global function definition for
#>     ‘resample_to_field’
#>   window_plot_temp_compare: no visible global function definition for
#>     ‘resample_sim’
#>   window_plot_temp_compare: no visible global function definition for
#>     ‘interp’
#>   window_plot_temp_compare : gen_default_fig: no visible global function
#>     definition for ‘valid_fig_path’
#>   window_plot_temp_compare : gen_default_fig: no visible global function
#>     definition for ‘png’
#>   window_plot_temp_compare : gen_default_fig: no visible global function
#>     definition for ‘par’
#>   window_plot_temp_compare : .stacked_layout: no visible global function
#>     definition for ‘.simple_layout’
#>   window_plot_temp_compare : colbar_layout: no visible global function
#>     definition for ‘layout’
#>   window_plot_temp_compare : .plot_df_heatmap: no visible global function
#>     definition for ‘colorRampPalette’
#>   window_plot_temp_compare : .plot_df_heatmap: no visible global function
#>     definition for ‘head’
#>   window_plot_temp_compare : .plot_df_heatmap: no visible global function
#>     definition for ‘.filled.contour’
#>   window_plot_temp_compare : .plot_df_heatmap_diff: no visible global
#>     function definition for ‘colorRampPalette’
#>   window_plot_temp_compare : .plot_df_heatmap_diff: no visible global
#>     function definition for ‘head’
#>   window_plot_temp_compare : .plot_df_heatmap_diff: no visible global
#>     function definition for ‘.filled.contour’
#>   window_plot_temp_compare : plot_layout: no visible global function
#>     definition for ‘plot’
#>   window_plot_temp_compare : axis_layout: no visible global function
#>     definition for ‘axis’
#>   window_plot_temp_compare : axis_layout: no visible global function
#>     definition for ‘par’
#>   window_plot_temp_compare : color_key: no visible global function
#>     definition for ‘plot’
#>   window_plot_temp_compare : color_key: no visible global function
#>     definition for ‘par’
#>   window_plot_temp_compare : color_key: no visible global function
#>     definition for ‘axis’
#>   window_plot_temp_compare : color_key: no visible global function
#>     definition for ‘polygon’
#>   window_plot_temp_compare : color_key: no visible global function
#>     definition for ‘text’
#>   window_plot_temp_compare : color_key_diff: no visible global function
#>     definition for ‘plot’
#>   window_plot_temp_compare : color_key_diff: no visible global function
#>     definition for ‘par’
#>   window_plot_temp_compare : color_key_diff: no visible global function
#>     definition for ‘axis’
#>   window_plot_temp_compare : color_key_diff: no visible global function
#>     definition for ‘polygon’
#>   window_plot_temp_compare : color_key_diff: no visible global function
#>     definition for ‘text’
#>   window_plot_temp_compare: no visible global function definition for
#>     ‘compare_to_field’
#>   window_plot_temp_compare: no visible global function definition for
#>     ‘dev.copy’
#>   window_plot_temp_compare: no visible binding for global variable ‘pdf’
#>   window_plot_temp_compare: no visible global function definition for
#>     ‘dev.off’
#>   window_plot_temp_compare: no visible global function definition for
#>     ‘points’
#>   window_plot_temp_compare: no visible global function definition for
#>     ‘text’
#>   window_select_SI_calculation : <anonymous>: no visible binding for
#>     global variable ‘dir_field_temp’
#>   window_select_SI_calculation : <anonymous>: no visible binding for
#>     global variable ‘dir_field_level’
#>   window_select_SI_calculation : <anonymous>: no visible binding for
#>     global variable ‘label_status_SI_calculation’
#>   window_select_SI_calculation: no visible binding for '<<-' assignment
#>     to ‘label_status_SI_calculation’
#>   window_select_auto_kalib : <anonymous>: no visible binding for global
#>     variable ‘boundary.env’
#>   window_select_auto_kalib: no visible binding for '<<-' assignment to
#>     ‘but_cal_si_auto’
#>   window_select_auto_kalib : <anonymous>: no visible binding for global
#>     variable ‘dir_field_temp’
#>   window_select_auto_kalib : <anonymous>: no visible binding for global
#>     variable ‘dir_field_level’
#>   window_select_auto_kalib : <anonymous>: no visible binding for global
#>     variable ‘label_status_CAL_calculation’
#>   window_select_auto_kalib: no visible binding for '<<-' assignment to
#>     ‘label_status_CAL_calculation’
#>   windows_main_menu: no visible binding for '<<-' assignment to
#>     ‘workspace’
#>   windows_main_menu: no visible binding for '<<-' assignment to
#>     ‘arg_meteo’
#>   windows_main_menu: no visible binding for '<<-' assignment to
#>     ‘multi_inflow’
#>   windows_main_menu: no visible binding for '<<-' assignment to
#>     ‘multi_outflow’
#>   windows_main_menu: no visible binding for '<<-' assignment to
#>     ‘arg_inflow’
#>   windows_main_menu: no visible binding for '<<-' assignment to
#>     ‘arg_outflow’
#>   windows_main_menu: no visible binding for '<<-' assignment to
#>     ‘dir_field_temp’
#>   windows_main_menu: no visible binding for '<<-' assignment to
#>     ‘dir_field_level’
#>   windows_main_menu: no visible binding for '<<-' assignment to
#>     ‘List_parameter’
#>   windows_main_menu: no visible binding for '<<-' assignment to
#>     ‘List_values’
#>   windows_main_menu: no visible binding for '<<-' assignment to
#>     ‘dfList_Temp’
#>   windows_main_menu: no visible binding for '<<-' assignment to
#>     ‘dfList_Level’
#>   windows_main_menu: no visible binding for '<<-' assignment to
#>     ‘label_workspace’
#>   windows_main_menu: no visible binding for '<<-' assignment to
#>     ‘label_workspace_project’
#>   windows_main_menu: no visible binding for '<<-' assignment to
#>     ‘button_new_workspace’
#>   windows_main_menu : <anonymous>: no visible binding for '<<-'
#>     assignment to ‘workspace’
#>   windows_main_menu : <anonymous>: no visible global function definition
#>     for ‘read_nml’
#>   windows_main_menu : <anonymous>: no visible global function definition
#>     for ‘write_nml’
#>   windows_main_menu : <anonymous>: no visible binding for global variable
#>     ‘workspace’
#>   windows_main_menu: no visible binding for '<<-' assignment to
#>     ‘button_workspace’
#>   windows_main_menu : <anonymous> : <anonymous>: no visible global
#>     function definition for ‘read_nml’
#>   windows_main_menu : <anonymous> : <anonymous>: no visible global
#>     function definition for ‘write_nml’
#>   windows_main_menu : <anonymous> : <anonymous>: no visible binding for
#>     global variable ‘workspace’
#>   windows_main_menu: no visible binding for '<<-' assignment to
#>     ‘label_met_data’
#>   windows_main_menu : <anonymous>: no visible binding for global variable
#>     ‘dir_meteo’
#>   windows_main_menu : <anonymous>: no visible binding for global variable
#>     ‘arg_meteo’
#>   windows_main_menu: no visible binding for '<<-' assignment to
#>     ‘label_inflow_data’
#>   windows_main_menu : <anonymous>: no visible binding for global variable
#>     ‘multi_inflow’
#>   windows_main_menu : <anonymous>: no visible binding for global variable
#>     ‘dir_inflow’
#>   windows_main_menu : <anonymous>: no visible binding for global variable
#>     ‘arg_inflow’
#>   windows_main_menu: no visible binding for '<<-' assignment to
#>     ‘label_outflow_data’
#>   windows_main_menu : <anonymous>: no visible binding for global variable
#>     ‘multi_outflow’
#>   windows_main_menu : <anonymous>: no visible binding for global variable
#>     ‘dir_outflow’
#>   windows_main_menu : <anonymous>: no visible binding for global variable
#>     ‘arg_outflow’
#>   windows_main_menu: no visible binding for '<<-' assignment to
#>     ‘label_nml_status’
#>   windows_main_menu: no visible binding for '<<-' assignment to
#>     ‘label_nml_range’
#>   windows_main_menu: no visible binding for '<<-' assignment to
#>     ‘button_field_temp’
#>   windows_main_menu : <anonymous>: no visible binding for '<<-'
#>     assignment to ‘dir_field_temp’
#>   windows_main_menu : <anonymous>: no visible binding for global variable
#>     ‘dir_field_temp’
#>   windows_main_menu: no visible binding for global variable
#>     ‘button_field_temp’
#>   windows_main_menu: no visible binding for '<<-' assignment to
#>     ‘label_field_level’
#>   windows_main_menu: no visible binding for '<<-' assignment to
#>     ‘button_field_level’
#>   windows_main_menu : <anonymous>: no visible binding for '<<-'
#>     assignment to ‘dir_field_level’
#>   windows_main_menu : <anonymous>: no visible binding for global variable
#>     ‘dir_field_level’
#>   windows_main_menu: no visible binding for global variable
#>     ‘button_field_level’
#>   windows_main_menu: no visible binding for '<<-' assignment to
#>     ‘label_status_build’
#>   windows_main_menu : <anonymous>: no visible global function definition
#>     for ‘get_nml_value’
#>   Undefined global functions or variables:
#>     .filled.contour .simple_layout List_parameter List_parameter_temp
#>     List_values aov arg_inflow arg_meteo arg_outflow axis barplot
#>     boundary.env but_cal_si_auto button_autocalib button_build
#>     button_cal_SI_value button_confi button_field_level button_field_temp
#>     button_set_parameter cb checkbox_Level_plot checkbox_Level_rmse
#>     checkbox_Temp_plot checkbox_Temp_plot2 checkbox_Temp_plot3
#>     checkbox_Temp_plot4 checkbox_Temp_rmse colorRampPalette
#>     compare_to_field dev.copy dev.cur dev.off dev.set dir_field_level
#>     dir_field_temp dir_inflow dir_meteo dir_outflow dir_output
#>     get.offsets get_nml_value get_var gewaehlt gewaehlterwert head hist
#>     install.packages interp k l label_inflow_data label_met_data
#>     label_nml_range label_outflow_data label_status_CAL_calculation
#>     label_status_SI_calculation label_status_build layout legend lines
#>     list_0_data list_missing_data lowess multi_inflow multi_outflow
#>     n2mfrow na.kalman na.omit par pdf plot plot_var png points polygon
#>     read.csv read_nml resample_sim resample_to_field set_nml shapiro.test
#>     sim_vars stack strwidth text valid_fig_path workspace write.csv
#>     write.table write_nml
#>   Consider adding
#>     importFrom("grDevices", "colorRampPalette", "dev.copy", "dev.cur",
#>                "dev.off", "dev.set", "n2mfrow", "pdf", "png")
#>     importFrom("graphics", ".filled.contour", "axis", "barplot", "hist",
#>                "layout", "legend", "lines", "par", "plot", "points",
#>                "polygon", "strwidth", "text")
#>     importFrom("stats", "aov", "lowess", "na.omit", "shapiro.test")
#>     importFrom("utils", "head", "install.packages", "read.csv", "stack",
#>                "write.csv", "write.table")
#>   to your NAMESPACE file.
#> 
#> 0 errors ✔ | 3 warnings ✖ | 3 notes ✖
#> Error: R CMD check found WARNINGs

jsta/glmgui documentation built on May 20, 2019, 12:36 p.m.