README.md

In jstinzi/plantecowrap: Enhancing Capabilities of 'plantecophys'

plantecowrap

{plantecowrap} Provides wrapping functions to add to capabilities to 'plantecophys' (Duursma, 2015, ). Key added capabilities include temperature responses of mesophyll conductance (gm, gmeso), apparent Michaelis-Menten constant for rubisco carboxylation in air (Km, Kcair),and photorespiratory CO2 compensation point (GammaStar) for fitting A-Ci or A-Cc curves for C3 plants (for temperature responses of gm, Km, & GammaStar, see Bernacchi et al., 2002, ; for theory on fitting A-Ci or A-Cc curves, see Farquhar et al., 1980; , von Caemmerer, 2000, ISBN:064306379X; Ethier & Livingston, 2004 ; and Gu et al., 2010, ). Includes the ability to fit the Arrhenius and modified Arrhenius temperature response functions (see Medlyn et al., 2002, ) for maximum rubisco carboxylation rates (Vcmax) and maximum electron transport rates (Jmax) (see Farquhar et al., 1980; ).

For information on how to use the code, please see the vignettes folder. To download this package, run the following code in R:

devtools::install_github("jstinzi/plantecowrap")

Please direct any questions or comments to me at: [e-mail]

Or you can log an issue on the package webpage at: https://github.com/jstinzi/plantecowrap/issues.

jstinzi/plantecowrap documentation built on May 3, 2020, 7:58 p.m.