acceptance_rate | Compute acceptance rate |
add.path | Add MCMC chain path to a contour plot of a density |
donut | Unnormalized log density of a donut disribution |
donut.hamiltonian | Hamiltonian equations of the donut disribution |
hmc | Hamiltonian Monte Carlo (HMC) sampling |
hmc.run | Run one HMC chain |
metropolis | Metropolis sampling |
metropolis.run | Run one metropolis chain |
plt.surface | Create contour plot of a density |
postproc | Things to do after running a sampler |
print.info | Print MCMC chain info |
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