rstan_rebuild_trajectory: Recreate an HMC trajectory

Description Usage Arguments Value

View source: R/rstan_rebuild_trajectory.R

Description

Recreate an HMC trajectory given a parameter and momentum draw, a maximum number of leapfrog steps to take, a stepsize, and an inverse metric.

Usage

1
rstan_rebuild_trajectory(fit, udraws, mdraws, leapfrogs, stepsize, inv_metric)

Arguments

fit

An rstan stanfit object

udraws

A vector of unconstrained parameters to start the trajectory from

mdraws

A vector of momentums to start the trajectory from

leapfrogs

Number of leapfrog steps to integrate in each direction

stepsize

Stepsize for leapfrog integrator

inv_metric

Positive definite inverse metric

Value

A dataframe with the reconstructed trajectory


jtimonen/stanbreaker documentation built on Jan. 20, 2021, 12:34 a.m.