API for juanbot/G2PML
| Global functions | |
|---|---|
| ameliePlot | Source code |
| amelieStudy | Man page Source code |
| annotateWithAmelie | Man page Source code |
| availableSpecificityData | Source code |
| caretLearn | Source code |
| dataHandlerMethods | Source code |
| dealWithNA | Man page Source code |
| ensembleLearn | Man page Source code |
| ensembleLearnKFold | Man page Source code |
| ensembleLearnTournament | Source code |
| ensemblePredict | Source code |
| ensemblePredictAllGenomev2 | Source code |
| evalEnsemble | Source code |
| evalEnsembleOneShot | Source code |
| evalEnsembles | Source code |
| evalEnsemblesOneShot | Source code |
| featureSelection | Man page Source code |
| featureSelectionPlot | Man page Source code |
| fromEnsembl2GeneNameBM | Source code |
| fromGeneName2EnsemblBM | Source code |
| fromGenes2MLData | Man page Source code |
| fromLong2ShortTissue | Source code |
| fromSymbol2Hugo | Source code |
| g2pmlRun | Source code |
| g2pmlpredict | Source code |
| genLearningDataSet | Source code |
| generateMLDB | Man page Source code |
| generateMLDBByGene | Source code |
| getAllGeneValues | Man page Source code |
| getCodingGenome | Source code |
| getDBFile | Source code |
| getGelGenes | Man page Source code |
| getGeneValues | Source code |
| getGeneValuesAdjacencySpecificity | Source code |
| getGeneValuesCountsOverlap | Source code |
| getGeneValuesCountsProtCodOverlap | Source code |
| getGeneValuesDPI | Source code |
| getGeneValuesDSI | Source code |
| getGeneValuesEvoTol | Source code |
| getGeneValuesExACpLI | Source code |
| getGeneValuesExACpMiss | Source code |
| getGeneValuesExACpNull | Source code |
| getGeneValuesExACpRec | Source code |
| getGeneValuesExpressionSpecificity | Source code |
| getGeneValuesGCcontent | Source code |
| getGeneValuesGeneLength | Source code |
| getGeneValuesHexAlt3.5EST | Source code |
| getGeneValuesHexAlt3EST | Source code |
| getGeneValuesHexAlt5EST | Source code |
| getGeneValuesHexConstExons | Source code |
| getGeneValuesHexESTCount | Source code |
| getGeneValuesIntronicLength | Source code |
| getGeneValuesLoFTool | Source code |
| getGeneValuesNumJunctions | Source code |
| getGeneValuesRVIS | Source code |
| getGeneValuesRankedMMSpecificity | Source code |
| getGeneValuesString | Source code |
| getGeneValuesTranscriptCount | Source code |
| getGeneValuesgnomadoeLoF | Source code |
| getGeneValuesgnomadoeMiss | Source code |
| getGeneValuesgnomadpLI | Source code |
| getGeneValuesgnomadpMiss | Source code |
| getGeneValuesgnomadpNull | Source code |
| getGeneValuesgnomadpRec | Source code |
| getGeneValuespAD | Source code |
| getGeneValuespAR | Source code |
| getGenesFromPanelApp | Man page Source code |
| getHits | Source code |
| getPanelFromPanelApp | Man page Source code |
| getPanelsFromPanelApp | Man page Source code |
| getPredictedGenes | Source code |
| getSingleConditionSet | Source code |
| getSpecificityMatrix | Source code |
| getVarsFromFS | Man page Source code |
| getVarsMetaDataFromCaretFS | Source code |
| getVarsMetaDataFromFS | Man page Source code |
| milkEnsemble | Source code |
| pcaPlot | Man page Source code |
| prettyPredictorName | Man page Source code |
| seedGenesVsPredictions | Man page Source code |
| setDBFile | Source code |
| stats | Source code |
| tsneStudy | Man page Source code |
| umapPlot | Man page Source code |
