getVarsMetaDataFromFS: Which direction and to what extent do your important features...

In juanbot/G2PML:

Description

getVarsFromFS extracts from the output of featureSelection the most important features based a voting system across bootstraps. Then for the most-voted features obtain the sign and effect sizes of each feature.

Usage

getVarsMetaDataFromFS(allfsdata, r = r, panel = "Unknown")

Arguments

allfsdata	list of rfe objects. Output of featureSelection.
r	num scalar. Between 0-1. Minimum proportion of bootstraps that must have selected that feature as important.
panel	chr scalar. The GE panel name from which input genes were extracted.

Value

list with all counts, signs, effect sizes and mean effect sizes of all important features across all bootstraps

Examples

getVarsMetaDataFromFS(allfsdata, r = 0.6, panel = "Unknown")

juanbot/G2PML documentation built on Aug. 1, 2020, 5:07 a.m.