read_sigspec: read_sigspec

View source: R/read_sigspec.R

read_sigspecR Documentation

read_sigspec

Description

read_sigspec reads SigSpec output files

Usage

read_sigspec(
  filename = NULL,
  type = c("pwspec", "residuals", "frequencies", "mstrack")
)

Arguments

filename

String, scalar. Input SigSpec oscillation file (.dat)

type

String. Type of file to be read: "pwspc", for s000000.dat,resspec.dat, and s00000i.dat files; "residuals", for residuals.dat and t00000i.dat files; or "frequencies" (default), for result.dat and r00000i.dat files.

Details

This function takes one argument, the SigSpec (.dat) to be read with full path. It stores the result in an R dataframe. The function reads

Powerspectra files:

  • s000000.dat contains the spectrum of the original time series

  • resspec.dat represents the residual spectrum after finishing the prewhitening sequence.

  • s00000i.dat contains the spectrum of the iteration i

Residuals files (timeseries)

  • residuals.dat the residuals after prewhitening all signal components found significant. The column format is the same as for the time series input file

  • t00000i.dat are the residuals of iteration i

Results files (frequencies)

  • result.dat contains a list of all identified sig maxima

  • r00000i.dat are the results of iteration i

Results files (multitrack)

  • m00000i.dat contains the changes in frequency, amplitude and phase of each signal component in the prewhitening cascade.They are an alternative representation of the result files. Instead of a file index that refers to the iteration, the file index of the MultiSine track files m#index#.dat refers to the index of the component in the result files.

All the details can be found in the SigSpec website and its online manual at SigSpec online

Value

A column-named dataframe containing the following data. Depending on data type the dataframe will contain

Spectra

  • f: (float) frequency (inverse time units)

  • sigf: (float) significance

  • amp: (float) DFT amplitude (units of observable)

  • phase: (float) Fourier-space phase angle (rad)

  • phasems: (float) Fourier-space phase angle of maximum sig (rad)

  • ⁠C1,C2⁠: Two additional columns containing -1 and 0 (see SigSpec manual for more details)

Residuals

  • flux: (float) flux of the lightcurve (units of observable)

  • time: (float) time (units of observable)

Results

  • f: (float) frequency (inverse time units)

  • sigf: (float) significance

  • amp: (float) amplitude (units of observable)

  • phase: (float) phase angle (rad)

  • rms: (float) rms scatter of the time series before prewhitening

  • pps: (float) point-to-point scatter of the time series before prewhitening

  • sigfcum: (float) the cumulative sig for all frequency components detected so far.

MultiSine tracks

  • f: (float) frequency (inverse time units)

  • amp: (float) amplitude (units of observable)

  • phase: (float) phase angle (rad)

See Also

read_corot

Examples

myfreqs <- read_sigspec('/myhome/results.dat')

## Not run: 
  read_sigspec('/myhome/results.dat')

## End(Not run)


juancasy/tostada documentation built on March 13, 2024, 10:57 p.m.