PCA_ind_plot: Interactive PCA indivuals plot

In juba/imva: Interactive Interfaces for Results Exploration

Interactive PCA indivuals plot

Description

This function generates an HTML widget displaying the individuals plot of a PCA result.

Usage

PCA_ind_plot(
  res,
  xax = 1,
  yax = 2,
  ind_sup = TRUE,
  ind_lab_min_contrib = 0,
  col_var = NULL,
  symbol_var = NULL,
  opacity_var = NULL,
  size_var = NULL,
  size_range = c(10, 300),
  lab_var = NULL,
  zoom_callback = NULL,
  in_explor = FALSE,
  ...
)

Arguments

res	Result of prepare_results() call
xax	Horizontal axis number
yax	Vertical axis number
ind_sup	TRUE to display supplementary individuals
ind_lab_min_contrib	Contribution threshold to display points labels
col_var	variable to be used for points color
symbol_var	name of the variable for points symbol
opacity_var	name of the variable for points opacity
size_var	name of the variable for points size
size_range	points size range with format c(minimum, maximum)
lab_var	variable to be used for points names
zoom_callback	scatterD3 zoom callback JavaScript body
in_explor	wether the plot is to be displayed in the explor interface
...	Other arguments passed to scatterD3

juba/imva documentation built on Oct. 2, 2023, 3:06 p.m.