Files in juba/umapscan

UMAP and DBSCAN Pragmatic and Supervised clustering

.Rbuildignore

.github/workflows/R-CMD-check.yaml

.gitignore

DESCRIPTION

NAMESPACE

NEWS.md R/clustering.R R/clustering_plots.R R/keyness.R R/umapscan.R R/umapscan_explor.R R/utils.R README.md

_pkgdown.yml

docs/404.html

docs/authors.html

docs/docsearch.css

docs/docsearch.js

docs/index.html

docs/link.svg

docs/news/index.html

docs/pkgdown.css

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/collapse_clusters.html

docs/reference/compute_clusters-1.png

docs/reference/compute_clusters-2.png

docs/reference/compute_clusters.html

docs/reference/describe_clusters-1.png

docs/reference/describe_clusters-2.png

docs/reference/describe_clusters-3.png

docs/reference/describe_clusters-4.png

docs/reference/describe_clusters-5.png

docs/reference/describe_clusters.html

docs/reference/explor_umapscan.html

docs/reference/get_cluster_data-1.png

docs/reference/get_cluster_data.html

docs/reference/get_clusters_membership-1.png

docs/reference/get_clusters_membership-2.png

docs/reference/get_clusters_membership.html

docs/reference/get_ids.html

docs/reference/get_leaves.html

docs/reference/get_noise_ids.html

docs/reference/index.html

docs/reference/map_plot.html

docs/reference/new_umapscan.html

docs/reference/plot.umapscan-1.png

docs/reference/plot.umapscan-2.png

docs/reference/plot.umapscan.html

docs/reference/plot_clusters-1.png

docs/reference/plot_clusters-2.png

docs/reference/plot_clusters-3.png

docs/reference/plot_clusters.html

docs/reference/print.umapscan.html

docs/reference/qualitative_palette.html

docs/reference/reinit_clusters.html

docs/reference/remove_cluster-1.png

docs/reference/remove_cluster-2.png

docs/reference/remove_cluster.html

docs/reference/rename_cluster-1.png

docs/reference/rename_cluster.html

docs/reference/umapscan_tree.html

docs/sitemap.xml

man/clust_collapse.Rd man/clust_compute.Rd man/clust_describe.Rd man/clust_get_data.Rd man/clust_label.Rd man/clust_membership.Rd man/clust_plot.Rd man/clust_reinit.Rd man/clust_remove.Rd man/clust_remove_noise.Rd man/clust_rename.Rd man/get_leaves.Rd man/get_members.Rd man/get_noise_members.Rd man/keyness_stats.Rd man/map_plot.Rd man/new_umapscan.Rd man/plot.umapscan.Rd man/print.umapscan.Rd man/qualitative_palette.Rd man/umapscan_explor.Rd man/umapscan_tree.Rd

tests/figs/deps.txt

tests/figs/umapscan-clustering-plots/barplot-clusters-description.svg

tests/figs/umapscan-clustering-plots/base-cluster-plot.svg

tests/figs/umapscan-clustering-plots/boxplot-clusters-description-without-labels.svg

tests/figs/umapscan-clustering-plots/boxplot-clusters-description.svg

tests/figs/umapscan-clustering-plots/full-cluster-plot.svg

tests/figs/umapscan-clustering-plots/keyness-clusters-description.svg

tests/figs/umapscan-clustering-plots/keyness-full-clusters-description.svg

tests/figs/umapscan-clustering-plots/keyness-lr-clusters-description.svg

tests/figs/umapscan-clustering-plots/noise-cluster-plot.svg

tests/figs/umapscan-clustering-plots/ridges-clusters-description.svg

tests/figs/umapscan-plots/base-umapscan-plot.svg

tests/figs/umapscan-plots/colored-umapscan-plot.svg

tests/figs/umapscan-plots/full-umapscan-plot.svg

tests/testthat.R tests/testthat/test_clustering.R tests/testthat/test_plots.R tests/testthat/test_plots_clustering.R tests/testthat/test_umapscan.R

tests/values/get_cluster_membership1.rds

tests/values/get_cluster_membership2.rds

tests/values/get_cluster_membership3.rds

tests/values/get_cluster_membership4.rds

tests/values/rename1.rds

tests/values/umapscan1.rds

tests/values/umapscan2.rds

tests/values/umapscan3.rds

travail.R

umapscan.Rproj

juba/umapscan documentation built on Aug. 29, 2020, 7:31 a.m.