docs/readme.md

In judgelord/netlit: Augment a Literature Review with Network Analysis Statistics

Replication files

This document is available online at https://judgelord.github.io/netlit/readme

All of the data and code required to reproduce the figures in the body and supplements are available on the github repository for the netlit package (github.com/judgelord/netlit) as described below. Clone a copy of all replication data and code on the command line with:

git clone github.com/judgelord/netlit

The package will soon be on CRAN. Until then, install the package in R:

devtools::install_github("judgelord/netlit")

Because live package vignettes may change in the future, we have archived submission versions of the data in /replication_data/ and submission versions of the vignettes in /docs/.

Body text

Figures 2 and 3 are generated by the main netlit vignette, with the submission version archived as netlit-replication.Rmd.

• data: /replication_data/
• /replication_data/literature.rda

• /replication_data/node_attributes.rda

• code: /docs/netlit-replication.Rmd

• live: https://judgelord.github.io/netlit/netlit-replication

• raw: https://github.com/judgelord/netlit/blob/main/docs/netlit-replication.Rmd

• output figures: /docs/netlit-replication_files/figure-html/

• Figure 2: ggraph-1.png and figure2.pdf
• Figure 3a: ggraph-subset1.png or figure3a.pdf
• Figure 3b: ggraph-subset2.png or figure3b.pdf

*Note: The body of the paper includes hand-cropped versions of Figures 3a and 3b that focus on the key part of the network.

Supplements

Simulating Biased Literature Reviews Supplement

All the figures in the Simulating Biased Literature Reviews Supplement are created by /docs/vignette-bias.Rmd

• data: /replication_data/
• /replication_data/literature.rda

• /replication_data/literature_metadata.rda

• code: /docs/vignette-bias.Rmd

• live: https://judgelord.github.io/netlit/vignette-bias

• raw: https://github.com/judgelord/netlit/blob/main/docs/vignette-bias.Rmd

• output figures: /docs/vignette-bias_files/figure-html/

Applied Researcher Experiment Supplement

All the figures in the Applied Researcher Experiment Supplement are created by /docs/vignette-IR.Rmd

• data: /replication_data/
• /replication_data/IR_evaluations.rda

• /replication_data/IR_original_networks.rda

• code: /docs/vignette-IR.Rmd

• live: https://judgelord.github.io/netlit/vignette-IR

• raw: https://github.com/judgelord/netlit/blob/main/docs/vignette-IR.Rmd

• output figures: /docs/vignette-IR_files/figure-html/

judgelord/netlit documentation built on Jan. 3, 2023, 2:42 p.m.