gwas_results: Simulated data for 60,000 SNPs from two studies
In juliedwhite/miamiplot: Create a ggplot2 miami plot

gwas_results

R Documentation

Simulated data for 60,000 SNPs from two studies

Description

A simulated dataset containing the rsid, chromosome, position, beta value, standard error, t-statistic, p-value, and study name for 60,000 SNPs total. Each study has 30,000 SNPs spread across 22 chromosomes.

Usage

gwas_results

Format

A data.frame with 60,000 rows and 8 variables:

rsid: Variant name
chr: Chromosome
pos: Base pair position
beta: Beta value from simulated GWAS
se: Standard error from simulated GWAS
tstat: T-statistic from simulated GWAS
pval: P-value from simulated GWAS
study: Either study A or study B, to signify two GWAS of the same phenotypes that have been combined for plotting purposes.