get_mirdb_net: Retrieve miRNA-gene interaction from miRDB
In jvfe/miRminer: Retrieving miRNA data from the web
Description
Usage
Arguments
Examples
Description
Queries miRDB for predicted miRNA-target interactions, returning a dataframe.
Supports same species miRDB supports, such as Homo sapiens, Mus musculus and
Rattus norvegicus. Each miRNA has to be preceeded by it's 3-letter species id.
Usage
1
get_mirdb_net(mirna)
Arguments
mirna
A string corresponding to a microRNA ID, must be preceded by the 3-letter
species code, e.g. 'hsa' or 'mmu'.
Examples
1
2
get_mirdb_net("mmu-mir-100-3p")
get_mirdb_net("hsa-miR-101-2-5p")
jvfe/miRminer documentation built on July 20, 2020, 11:13 p.m.
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Description Usage Arguments Examples
Description
Queries miRDB for predicted miRNA-target interactions, returning a dataframe. Supports same species miRDB supports, such as Homo sapiens, Mus musculus and Rattus norvegicus. Each miRNA has to be preceeded by it's 3-letter species id.
Usage
1 | get_mirdb_net(mirna)
|
Arguments
mirna |
A string corresponding to a microRNA ID, must be preceded by the 3-letter species code, e.g. 'hsa' or 'mmu'. |
Examples
1 2 | get_mirdb_net("mmu-mir-100-3p")
get_mirdb_net("hsa-miR-101-2-5p")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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