visualize_network: Visualize integrated network

In kalganem/Kinograte: Kinograte: Netwrok-based multi-omics Integration

Visualize integrated network

Description

This function visualizes the integrated results with an interactive network

Usage

visualize_network(
  nodes,
  edges,
  cluster_df = NULL,
  layout = "layout_with_fr",
  seed = 123,
  options_by = "group"
)

Arguments

nodes	network nodes
edges	network edges
cluster_df	(optional) network clusters dataframe generated by the kinograte function
layout	layout option from igraph. default = "layout_with_fr". See full list
seed	(optional) set seed
options_by	(optional) set dropdown menu, "group" or "cluster". Set NULL to remove dropdown menu

Value

visNetwork object

kalganem/Kinograte documentation built on April 27, 2022, 9:03 p.m.