TSS: based on a TxDb returns a GRanges with the TSS positions for...

In kamalfartiyal84/compEpiTools: Tools for computational epigenomics

Description

based on a TxDb returns a GRanges of width 1 with the TSS positions for all transcripts

Usage

TSS(txdb)

Arguments

txdb	An object of class TxDb

Details

based on a TxDb returns a GRanges of width 1 with the TSS positions for all transcripts

Value

A GRanges

References

http://genomics.iit.it/groups/computational-epigenomics.html

Examples

require(TxDb.Mmusculus.UCSC.mm9.knownGene)
txdb <- TxDb.Mmusculus.UCSC.mm9.knownGene
res <- TSS(txdb)
res[1:2]

kamalfartiyal84/compEpiTools documentation built on May 29, 2019, 5:40 a.m.