Should we operate on (many) basic Bioc objects like ExpressionSet
and SummarizedExperiment
and others, and basically store these objects inside our multi assay container.
list(assay1 = "ExpressionSet", assay2 = "SummarizedExperiment")
In this way we need to do tons of book keeping,
with associated metadata and friends. Or should this be limited to a small set of basic classes, with a single shared pData
object?
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