cluster_df: Re-orders a matrix by hierarchical clustering

In kazeera/hourglass: This Package Provides Visualizations of Annotated Numeric Data

Re-orders a matrix by hierarchical clustering

Description

Re-orders a matrix by hierarchical clustering

Usage

cluster_df(
  df3,
  dist_method = "euclidean",
  link_method = "ward.D",
  clust.by.row = T
)

Arguments

df3	Numeric matrix or data frame
dist_method	The distance measure to be used. Accepts the same values as method parameter in ?dist.
link_method	The agglomeration/clustering method to be used. Accepts the same values as method parameter in ?hclust.
clust.by.row	Logical indicating whether to cluster by row, else columnwise.

Value

An ordered matrix based on hierarchical clustering

kazeera/hourglass documentation built on April 5, 2025, 7:18 a.m.