anal.all | Analyze a backcross |
anal.leaps | Analyze a backcross by model selection methods |
anal.mcmc | Analyze a backcross by MCMC |
anal.multi | Simulations to test QTL analyses |
anal.multi2 | Simulations to test QTL analyses |
combine.mcmc | Combine multiple simulation results |
combine.sims | Combine multiple simulation results |
convertOutput | Convert output of anal.leaps, anal.mcmc or perm |
convertSim | Convert simulated data into form for R/qtl |
perm | Forward selection w/ permutation test |
plot_res | Plot simulation results |
qtlsim-internal | Internal qtlsim functions |
simbc | Simulate a backcross |
sim.mcmc | Simulations to test QTL analyses |
sim.null | Simulate under the null hypothesis of no QTLs. |
which.correct | Determine which QTLs were correctly identified in an analysis |
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