kellycochran/IsoDB: Framework for Analyzing Diverse Isoform Populations

Functions for assembling datasets generated from PacBio's IsoSeq post-sequencing pipeline, filtering out off-target and artifactual transcripts, and analyzing/visualizing the resulting curated transcriptomes. This package intends to enable researchers to easily convert IsoSeq output into a more interpretable format, characterize isoforms and isoform distributions, and compare datasets from multiple experiments.

Getting started

Package details

AuthorKelly Cochran <kelly.cochran36@gmail.com>
MaintainerKelly Cochran <kelly.cochran36@gmail.com>
LicenseGPL-3
Version0.3.1
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("kellycochran/IsoDB")
kellycochran/IsoDB documentation built on July 7, 2020, 2:17 p.m.