kellycochran/IsoDB: Framework for Analyzing Output of PacBio Sequencing Experiments

Functions for assembling datasets generated from PacBio's IsoSeq post-sequencing pipeline, filtering out off-target and artifactual transcripts, and analyzing/visualizing the resulting curated transcriptomes. This package intends to enable researchers to easily convert IsoSeq output into a more interpretable format, characterize isoforms and isoform distributions, and compare datasets from multiple experiments.

Getting started

Package details

AuthorKelly Cochran <[email protected]>
MaintainerKelly Cochran <[email protected]>
LicenseGPL-3
Version0.3.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("kellycochran/IsoDB")
kellycochran/IsoDB documentation built on Jan. 31, 2019, 4:29 a.m.