Multstoch: Create a matrix with output from multiple simulations for a...
In kelseyandersen/seedHealth: Scenario Analysis for Seed Health

Description Usage Arguments Details Examples

View source: R/Multstoch.R

This function creates a matrix for output from multiple simulations for a single parameter combination across nseasons

Multstoch(pHSinit2 = 0.8, Kx2 = 100, betax2 = 0.02,
  wxtnormm2 = 0.8, wxtnormsd2 = 0.3, hx2 = 1, mxtnormm2 = 1,
  mxtnormsd2 = 0.1, axtnormm2 = 1, axtnormsd2 = 0.1, rx2 = 0.1,
  zxtnormm2 = 1, zxtnormsd2 = 0.1, gx2 = 4, cx2 = 0.9, phix2 = 0,
  nseasons2 = 10, nsim2 = 10, HPcut2 = 0.5, pHScut2 = 0.5,
  maY2 = 100, miY2 = 0, thetax2 = 0.2, Ex2 = 0)

`Kx`	total number of plants
`betax`	maximum seasonal transmission rate
`wx`	environmental effect on transmission rate
`hx`	host effect on transmission rate
`mx`	vector management effect on transmission rate
`ax`	roguing effect in terms of decreased DP
`maY`	maximum attainable yield, end of season, in the absence of disease
`miY`	minimum yield when all plants are diseased (useable yield despite disease)
`thetax`	rate of decline of Yld with increasing disease incidence
`Ex`	amount of external inoculum around field
`rx`	reversion rate
`zx`	proportional selection against diseased plants
`gx`	seed production rate in healthy plants
`cx`	proportional seed production rate in diseased plants
`phix`	proportion clean seed purchased
`nseasons`	number of seasons