create_geneset_db: Format New Geneset Database
In kelsiereinaltt/GSEAplot: GSEA Analysis and Plotting Function
Description
Usage
Arguments
Value
Examples
Description
The create_geneset_db function allows users to create a new database. Given a list wich meets certain specifications, this function will reformat the data in the list to be saved into a database form compatible with GSEAplot functions.
Usage
1
create_geneset_db(database = "")
Arguments
database
A list, with the name of the list being the names of the genesets and elements of the list as the description/source and gene symbols.
Value
Database, saved as formatted_db, which may be saved to the work environment and an used in later GSEA analyses.
Examples
1
2
3
create_geneset_db(custom_db)
create_geneset_db(modified_db)
kelsiereinaltt/GSEAplot documentation built on Aug. 9, 2021, 2:58 a.m.
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Description Usage Arguments Value Examples
Description
The create_geneset_db function allows users to create a new database. Given a list wich meets certain specifications, this function will reformat the data in the list to be saved into a database form compatible with GSEAplot functions.
Usage
1 | create_geneset_db(database = "")
|
Arguments
database |
A list, with the name of the list being the names of the genesets and elements of the list as the description/source and gene symbols. |
Value
Database, saved as formatted_db, which may be saved to the work environment and an used in later GSEA analyses.
Examples
1 2 3 | create_geneset_db(custom_db)
create_geneset_db(modified_db)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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