Description Usage Arguments Value Examples
View source: R/read.fasta.alignment.R
This function reads a fasta alignment file and converts it to an easy-to-read data frame object. Each individual must have the same sequence length. The file cannot contain any comments.
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file |
The name of the file to be read. The file name should be provided within quotes, either as an absolute file path, or a relative file path given the current working directory, getwd(). |
Returns a data frame with taxon names as row names and a column for each site in the alignment.
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