kevinmcgregor/mintalt: Learn Direct Interaction Networks (Edited version where lambda can be specified)
Learns direct microbe-microbe interaction networks using a Poisson multivariate-normal hierarchical model with an L1 penalized precision matrix. Optimization is carried out using an iterative conditional modes algorithm.
Getting started
Browse package contents
Package details |
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| Author | Surojit Biswas, Meredith McDonald, Derek S. Lundberg, Jeffery L. Dangl, Vladimir Jojic |
| Maintainer | Surojit Biswas <surojitbiswas@g.harvard.edu> |
| License | GPL-2 |
| Version | 1.0.1 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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