process_tbl: flexibly read in a field and append an id to the output
In kevinmhadi/khtools: Making Mskilab Life Easier

process_tbl

R Documentation

flexibly read in a field and append an id to the output

perform an embarrassingly parallel operation on files i.e. read in and do some pre processing

process_tbl(
  tbl,
  field = "jabba_rds",
  id.field = "pair",
  read.fun,
  remove_ext = c(".gz", ".zip"),
  mc.cores = 1
)

`tbl`	table with fields to read in
`field`	field to read in
`id.field`	field with id to append to output
`read.fun`	function to read in, will try to guess based on extension, but may need to provide
`remove_ext`	extension strings to remove from file
`mc.cores`	number of cores