read_vcf2: read_vcf2
In kevinmhadi/khtools: Making Mskilab Life Easier
read_vcf2 R Documentation
read_vcf2
Description
read in a vcf file to granges with additional processing with bcftools
Usage
read_vcf2(
fn,
gr = NULL,
type = c("snps", "indels", "all"),
hg = "hg19",
geno = NULL,
swap.header = NULL,
verbose = FALSE,
add.path = FALSE,
tmp.dir = tempdir(),
...
)
Value
GRanges
kevinmhadi/khtools documentation built on Jan. 16, 2025, 4:18 p.m.
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| read_vcf2 | R Documentation |
read_vcf2
Description
read in a vcf file to granges with additional processing with bcftools
Usage
read_vcf2(
fn,
gr = NULL,
type = c("snps", "indels", "all"),
hg = "hg19",
geno = NULL,
swap.header = NULL,
verbose = FALSE,
add.path = FALSE,
tmp.dir = tempdir(),
...
)
Value
GRanges
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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