In kevinrue/BiocChallenges2: Challenges for the Bioconductor community

Guidelines

Note

This task can impact several aspects of Bioconductor and R packages for genomics.

• First, use of EDAM to tag Bioconductor packages and resources may aid in the processes of publicizing and discovering software and data
• Second, an EDAMviews tag may be added as an endorsed field for package DESCRIPTION
• Third, EDAM may integrate into the presentation of Bioconductor resources in the same manner as biocViews does presently; see the search box for software.

Evaluate EDAM and compare to biocViews

Investigate the biocViews vocabulary, and the EDAM ontology. For motivation, consider the display derived from the EDAM browser:

How can we take advantage of this terminology and concept structure? - Are there terms in biocViews for which EDAM terms are ready-to-use substitutes? - Are there concepts in biocViews that are lacking in EDAM that should be proposed for additions?

kevinrue/BiocChallenges2 documentation built on Nov. 2, 2021, 7:49 a.m.