lysis: A lysis Function
In kevinzhongxu/tslysis: A package to estimate taxon-specific microbial lysis
lysis R Documentation
A lysis Function
Description
This function allows calculating the taxon-specific lysis of microbe, based on the input of a tabular-separated otu table (.txt) that contains data from three rDNA/rRNA fractions (Cellular rDNA, Cellular rRNA and Extracellular rRNA) of each water sample.
Usage
lysis(otu_table)
Arguments
otu_table
'Path/To/Your/OTU_TABLE_FILE'; For example: otu_table="/home/kevin/Desktop/data/10reads-plus/otu_table_qiime2_otu_16S.txt".
Examples
##### If you want to estimate the taxon-specific lysis for prokaryotes, then run
lysis(otu_table="Path/To/Your/OTU_TABLE_FILE_16S.txt")
kevinzhongxu/tslysis documentation built on Feb. 23, 2025, 11:12 a.m.
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| lysis | R Documentation |
A lysis Function
Description
This function allows calculating the taxon-specific lysis of microbe, based on the input of a tabular-separated otu table (.txt) that contains data from three rDNA/rRNA fractions (Cellular rDNA, Cellular rRNA and Extracellular rRNA) of each water sample.
Usage
lysis(otu_table)
Arguments
otu_table |
'Path/To/Your/OTU_TABLE_FILE'; For example: otu_table="/home/kevin/Desktop/data/10reads-plus/otu_table_qiime2_otu_16S.txt". |
Examples
##### If you want to estimate the taxon-specific lysis for prokaryotes, then run
lysis(otu_table="Path/To/Your/OTU_TABLE_FILE_16S.txt")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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