API for kewok/Rgmf
R Toolkit Visualizing and Analyzing "Give Me Fever!" Epidemics
| Global functions | |
|---|---|
| Epidemic | Source code |
| animate_epidemic | Source code |
| calculate_AIR | Source code |
| calculate_CFR | Source code |
| calculate_DALY | Source code |
| calculate_FOI | Source code |
| calculate_herd_immunity_threshold | Source code |
| calculate_incidence | Source code |
| calculate_mortality_rate | Source code |
| contagion_network_evolution | Source code |
| convert_GMF_epidemic | Source code |
| convert_infection_times | Source code |
| convert_times | Source code |
| estimate_R0 | Source code |
| estimate_Re | Source code |
| id_patient_zero | Source code |
| outbreak_dataset_read | Source code |
| plot_cumulative_incidence | Source code |
| plot_incidence | Source code |
| plot_prevalence | Source code |
| reconstruct_epidemic_history | Source code |
| reconstruct_epidemic_network | Source code |
| reconstruct_host_history | Source code |
| setup_hosts | Source code |
| setup_parameters | Source code |
| summarize_trajectory | Source code |
| visualize_contagion_network | Source code |
| visualize_epidemic | Source code |
| visualize_epidemic_at_infection_event | Source code |
