MSE.Grids: A function to compute MSE of the GFA given robust components...

Description Usage Arguments

View source: R/MSE.Grids.R

Description

A function to compute MSE b/w observed and reconstructed data matrices for each replicate for each pair of (corThr, matchThr).

Usage

1
MSE.Grids(Ymtx, comps, match.res, corGrids, matchGrids)

Arguments

Ymtx

The set of observed data as an NxD matrix.

comps

A list of GFA replicates with posterior medians.

match.res

No description.

corGrids

is a vector of cor thresholds to be tested. Cor threshold defines how close two components are required to be, in terms of correlation, in order to match them.

matchGrids

is a vector of match thresholds to be tested. Match threshold describes the proportion of sampling chains that need to contain a component in order to include it in the robust components.


kforthman/optmThrGFA documentation built on Sept. 3, 2021, 1:35 p.m.