analyze_codominant_t0: Estimate f from codominant marker data assuming theta = 0,...

In kholsinger/Hickory: Analysis of within-population inbreeding and population differentiation

Description

Estimate f from codominant marker data assuming theta = 0, i.e., assuming that all populations have the same allele frequency at each locus

Usage

analyze_codominant_t0(genos, prior_pi, prior_f, ...)

Arguments

genos	A list in the format returned by read_marker_data()
prior_pi	A vector specifying lower and upper limits on pi
prior_f	A vector specifying lower and upper limits on f
...	Optional arguments passed to rstan::sampling()

Value

An object of class stanfit returned by rstan::sampling()

kholsinger/Hickory documentation built on Jan. 9, 2022, 6:30 p.m.