BioExprSet: An R6 class representing a high-throughput expression dataset...

In khughitt/eda: Exploratory Data Analysis in R

Description

An R6 class representing a high-throughput expression dataset along with associated gene and sample metadata.

Usage

# TODO

Arguments

• datasets: A list of datasets (matrices, data frames, etc.), each of which shared some column / row identifiers with the first entry in the list.

Fields

• datasets: List of datasets

Methods

• cross_cor(key1=1, key2=2, meas='pearson'): Computes cross-dataset correlation matrix between rows in two specified datasets.

• plot_cross_cor_heatmap(key1=1, key2=2, meas='pearson', interactive=TRUE): Plots multidataset correlation heatmap.

• print(): Prints an overview of the object instance.

Examples

TODO

khughitt/eda documentation built on May 7, 2019, 10:52 p.m.