Man pages for kieranrcampbell/mfa
Bayesian hierarchical mixture of factor analyzers for modelling genomic bifurcations
| calculate_chi | Calculate posterior chi precision parameters |
| create_synthetic | Create synthetic data |
| cs_sigmoid | Sigmoid function for activations - renamed to avoid naming... |
| empirical_lambda | Estimate the dropout parameter |
| log_sum_exp | Log sum of exponentials |
| map_branch | Find the MAP branch and uncertainty |
| mcmcify | Turn a matrix's columns into informative names |
| mfa | Fit a MFA object |
| plot_chi | Plot posterior precision parameters |
| plot_dropout_relationship | Plot the dropout relationship |
| plot_mfa_autocorr | Plot MFA autocorrelation |
| plot_mfa_trace | Plot MFA trace |
| posterior | Calculate the log-posterior during inference |
| print.mfa | Print an mfa fit |
| summary.mfa | Summarise an mfa fit |
| to_ggmcmc | Turn a trace list to a 'ggmcmc' object |
| transient | Transient mean function |
