spec_chr_plot: Regional Plot

In kimpw/girilab: genom plot

Description

Regional Plot

Usage

spec_chr_plot(
  g,
  m,
  t,
  chr = 8,
  tag_p = 3,
  y_lab = "p",
  name_gene = "PENK",
  y_min = NULL,
  y_max = NULL,
  y_ticks = NULL,
  cut_ctr = 2,
  sig_line1 = 3,
  sig_line2 = -3,
  color_tissue = NULL
)

Arguments

g	genedata
m	map data
t	tissue data
chr	chromosome
tag_p	where tag above p
y_lab	label y axis
name_gene	gene name select
y_min	min number tick
y_max	max number tick
y_ticks	how many tick
cut_ctr	zoom in/out
sig_line1	significant top number
sig_line2	significan bottom number
color_tissue	color choice

Value

plot

kimpw/girilab documentation built on March 21, 2020, 12:20 a.m.