R toolbox for NMR-based metabolic profiling. This is a comprehensive library that covers all basic steps of the metabolic profiling analysis pipeline. This includes reading-in 1D spectra from Bruker file format, data pre-processing, various normalisation methods, unsupervised and supervised multivariate analysis techniques and feature extraction. Most of the provided functions can also be used for MS data analysis (such as PQN normalisation or O-PLS). All combined with aesthetically pleasing visualisations using ggplot2.
Package details |
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Maintainer | Torben Kimhofer <tkimhofer@gmail.com> |
License | MIT + LICENSE file |
Version | 0.0.0.9002 |
URL | https://github.com/tkimhofer/MetaboMate |
Package repository | View on GitHub |
Installation |
Install the latest version of this package by entering the following in R:
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