Man pages for kindlychung/genetics
Population Genetics
| ci.balance | Experimental Function to Correct Confidence Intervals At or... |
| depreciated | Depreciated functions |
| diseq | Estimate or Compute Confidence Interval for the Single-Marker... |
| expectedGenotypes | Construct expected genotypes/haplotypes according to known... |
| genotype | Genotype or Haplotype Objects. |
| gregorius | Probability of Observing All Alleles with a Given Frequency... |
| groupGenotype | Group genotype values |
| homozygote | Extract Features of Genotype objects |
| HWE.chisq | Perform Chi-Square Test for Hardy-Weinberg Equilibrium |
| HWE.exact | Exact Test of Hardy-Weinberg Equilibrium for 2-Allele Markers |
| HWE.test | Estimate Disequilibrium and Test for Hardy-Weinberg... |
| LD | Pairwise linkage disequilibrium between genetic markers. |
| locus | Create and Manipulate Locus, Gene, and Marker Objects |
| makeGenotypes | Convert columns in a dataframe to genotypes or haplotypes |
| order.genotype | Order/sort genotype/haplotype object |
| plot.genotype | Plot genotype object |
| print.LD | Textual and graphical display of linkage disequilibrium (LD)... |
| summary.genotype | Allele and Genotype Frequency from a Genotype or Haplotype... |
| undocumented | Undocumented functions |
| write.pop.file | Create genetics data files |
