plot.genotype: Plot genotype object
In kindlychung/genetics: Population Genetics

Description Usage Arguments Value Author(s) See Also Examples

plot.genotype can plot genotype or allele frequency of a genotype object.

1
2
3

## S3 method for class 'genotype'
plot(x, type=c("genotype", "allele"),
  what=c("percentage", "number"), ...)

`x`	genotype object, as genotype.
`type`	plot "genotype" or "allele" frequency, as character.
`what`	show "percentage" or "number", as character
`...`	Optional arguments for `barplot`.

The same as in barplot.

Gregor Gorjanc

genotype, barplot

  set <- c("A/A", "A/B", "A/B", "B/B", "B/B", "B/B",
           "B/B", "B/C", "C/C", "C/C")
  set <- genotype(set, alleles=c("A", "B", "C"), reorder="yes")
  plot(set)
  plot(set, type="allele", what="number")