In kjohnsen/MMAPPR2data: Sample Data for MMAPPR2

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We first load the MMAPPR2data package:

library(MMAPPR2data, quietly = TRUE)

This package contains the following two functions, which provide easy access to the BAM files and their indices, returning BamFile objects:

exampleWTbam()
exampleMutBam()

Annotation data for the region is also included with the package and can be accessed with these two functions:

goldenFasta()
goldenGFF()

For details on the source of these files, and on their construction see ?MMAPPR2data and the inst/scripts/folder.

sessionInfo()

Thanks to Mike Love's r Biocpkg("alpineData") package for vignette structure inspiration.

kjohnsen/MMAPPR2data documentation built on Sept. 6, 2019, 12:58 p.m.