| atan3 | tan inverse of ratio of two numbers, mapping from 0 to 2pi. |
| bump_cell_ordering_class | Cell ordering into different phases on the cell cycle using... |
| bump_loglik_cellcycle | Loglikelihood of of sinusoidal genes in cell cycle |
| cell_ordering_full | Cell-phase ordering - post processing of estimated cell-phase |
| np_cell_ordering_class | Nonparametric cell ordering into different phases on the cell... |
| np_loglik_cellcycle | Loglikelihood of of sinusoidal genes in cell cycle |
| sim_sinusoidal_cycle | Simulate sinusoidal gene expression along cell phases on cell... |
| sin_cell_ordering_class | Cell ordering into different phases on the cell cycle using... |
| sin_cell_ordering_iter | Fitting sinusoidal model |
| sin_loglik_cellcycle | Loglikelihood of of sinusoidal genes in cell cycle |
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