np_loglik_cellcycle: Loglikelihood of of sinusoidal genes in cell cycle

Description Usage Arguments

View source: R/np_loglik_cellcycle.R

Description

Computes the loglikelihood of all the cells in the cycle under nonparametric smoothing

@author Kushal K Dey

@export

Usage

1
np_loglik_cellcycle(cycle_data, cell_times, fit, sigma)

Arguments

cell_times

: a N x 1 vector of cell times

cycle_data:

a N x G matrix, where N is number of cells, G number of genes

fit:

a celltime_levels(C) x G matrix of model fit from nonparametric cellcycleR

sigma:

the G x 1 vector of gene variation


kkdey/cellcycleR documentation built on May 20, 2019, 10:33 a.m.