Factor Loading Adaptive SHrinkage in R

.DS_Store

.Rbuildignore

.gitignore

.travis.yml

DESCRIPTION

NAMESPACE

R/.DS_Store

R/FactorGGBar.R
R/FactorGGStack.R
R/RcppExports.R
R/backfitting.R
R/data.R
R/flash.R
R/flashNMF.R
R/flash_factor_postprocess.R
R/greedy.R
R/tbackfit.R
R/tflash.R
R/tkron.R
README.Rmd
README.md
data/.DS_Store

data/flash_deng.rds

data/flash_deng_ex.rda

data/flash_deng_voom_Aug152016.rda

flashr.Rproj

inst/.DS_Store

inst/include/armadillo

inst/include/armadillo_bits/BaseCube_bones.hpp

inst/include/armadillo_bits/BaseCube_meat.hpp

inst/include/armadillo_bits/Base_bones.hpp

inst/include/armadillo_bits/Base_meat.hpp

inst/include/armadillo_bits/Col_bones.hpp

inst/include/armadillo_bits/Col_meat.hpp

inst/include/armadillo_bits/Cube_bones.hpp

inst/include/armadillo_bits/Cube_meat.hpp

inst/include/armadillo_bits/GenCube_bones.hpp

inst/include/armadillo_bits/GenCube_meat.hpp

inst/include/armadillo_bits/GenSpecialiser.hpp

inst/include/armadillo_bits/Gen_bones.hpp

inst/include/armadillo_bits/Gen_meat.hpp

inst/include/armadillo_bits/GlueCube_bones.hpp

inst/include/armadillo_bits/GlueCube_meat.hpp

inst/include/armadillo_bits/Glue_bones.hpp

inst/include/armadillo_bits/Glue_meat.hpp

inst/include/armadillo_bits/LICENSE.txt

inst/include/armadillo_bits/Mat_bones.hpp

inst/include/armadillo_bits/Mat_meat.hpp

inst/include/armadillo_bits/OpCube_bones.hpp

inst/include/armadillo_bits/OpCube_meat.hpp

inst/include/armadillo_bits/Op_bones.hpp

inst/include/armadillo_bits/Op_meat.hpp

inst/include/armadillo_bits/Proxy.hpp

inst/include/armadillo_bits/ProxyCube.hpp

inst/include/armadillo_bits/Row_bones.hpp

inst/include/armadillo_bits/Row_meat.hpp

inst/include/armadillo_bits/SizeCube_bones.hpp

inst/include/armadillo_bits/SizeCube_meat.hpp

inst/include/armadillo_bits/SizeMat_bones.hpp

inst/include/armadillo_bits/SizeMat_meat.hpp

inst/include/armadillo_bits/SpBase_bones.hpp

inst/include/armadillo_bits/SpBase_meat.hpp

inst/include/armadillo_bits/SpCol_bones.hpp

inst/include/armadillo_bits/SpCol_meat.hpp

inst/include/armadillo_bits/SpGlue_bones.hpp

inst/include/armadillo_bits/SpGlue_meat.hpp

inst/include/armadillo_bits/SpMat_bones.hpp

inst/include/armadillo_bits/SpMat_iterators_meat.hpp

inst/include/armadillo_bits/SpMat_meat.hpp

inst/include/armadillo_bits/SpOp_bones.hpp

inst/include/armadillo_bits/SpOp_meat.hpp

inst/include/armadillo_bits/SpProxy.hpp

inst/include/armadillo_bits/SpRow_bones.hpp

inst/include/armadillo_bits/SpRow_meat.hpp

inst/include/armadillo_bits/SpSubview_bones.hpp

inst/include/armadillo_bits/SpSubview_iterators_meat.hpp

inst/include/armadillo_bits/SpSubview_meat.hpp

inst/include/armadillo_bits/SpValProxy_bones.hpp

inst/include/armadillo_bits/SpValProxy_meat.hpp

inst/include/armadillo_bits/access.hpp

inst/include/armadillo_bits/arma_cmath.hpp

inst/include/armadillo_bits/arma_config.hpp

inst/include/armadillo_bits/arma_forward.hpp

inst/include/armadillo_bits/arma_ostream_bones.hpp

inst/include/armadillo_bits/arma_ostream_meat.hpp

inst/include/armadillo_bits/arma_rng.hpp

inst/include/armadillo_bits/arma_rng_cxx11.hpp

inst/include/armadillo_bits/arma_rng_cxx98.hpp

inst/include/armadillo_bits/arma_static_check.hpp

inst/include/armadillo_bits/arma_str.hpp

inst/include/armadillo_bits/arma_version.hpp

inst/include/armadillo_bits/arrayops_bones.hpp

inst/include/armadillo_bits/arrayops_meat.hpp

inst/include/armadillo_bits/auxlib_bones.hpp

inst/include/armadillo_bits/auxlib_meat.hpp

inst/include/armadillo_bits/compiler_setup.hpp

inst/include/armadillo_bits/compiler_setup_post.hpp

inst/include/armadillo_bits/cond_rel_bones.hpp

inst/include/armadillo_bits/cond_rel_meat.hpp

inst/include/armadillo_bits/config.hpp

inst/include/armadillo_bits/config.hpp.cmake

inst/include/armadillo_bits/constants.hpp

inst/include/armadillo_bits/constants_old.hpp

inst/include/armadillo_bits/debug.hpp

inst/include/armadillo_bits/def_arpack.hpp

inst/include/armadillo_bits/def_atlas.hpp

inst/include/armadillo_bits/def_blas.hpp

inst/include/armadillo_bits/def_hdf5.hpp

inst/include/armadillo_bits/def_lapack.hpp

inst/include/armadillo_bits/def_superlu.hpp

inst/include/armadillo_bits/diagmat_proxy.hpp

inst/include/armadillo_bits/diagview_bones.hpp

inst/include/armadillo_bits/diagview_meat.hpp

inst/include/armadillo_bits/diskio_bones.hpp

inst/include/armadillo_bits/diskio_meat.hpp

inst/include/armadillo_bits/distr_param.hpp

inst/include/armadillo_bits/eGlueCube_bones.hpp

inst/include/armadillo_bits/eGlueCube_meat.hpp

inst/include/armadillo_bits/eGlue_bones.hpp

inst/include/armadillo_bits/eGlue_meat.hpp

inst/include/armadillo_bits/eOpCube_bones.hpp

inst/include/armadillo_bits/eOpCube_meat.hpp

inst/include/armadillo_bits/eOp_bones.hpp

inst/include/armadillo_bits/eOp_meat.hpp

inst/include/armadillo_bits/eglue_core_bones.hpp

inst/include/armadillo_bits/eglue_core_meat.hpp

inst/include/armadillo_bits/eop_aux.hpp

inst/include/armadillo_bits/eop_core_bones.hpp

inst/include/armadillo_bits/eop_core_meat.hpp

inst/include/armadillo_bits/fft_engine.hpp

inst/include/armadillo_bits/field_bones.hpp

inst/include/armadillo_bits/field_meat.hpp

inst/include/armadillo_bits/fn_accu.hpp

inst/include/armadillo_bits/fn_all.hpp

inst/include/armadillo_bits/fn_any.hpp

inst/include/armadillo_bits/fn_approx_equal.hpp

inst/include/armadillo_bits/fn_as_scalar.hpp

inst/include/armadillo_bits/fn_chol.hpp

inst/include/armadillo_bits/fn_clamp.hpp

inst/include/armadillo_bits/fn_cond.hpp

inst/include/armadillo_bits/fn_conv.hpp

inst/include/armadillo_bits/fn_conv_to.hpp

inst/include/armadillo_bits/fn_cor.hpp

inst/include/armadillo_bits/fn_cov.hpp

inst/include/armadillo_bits/fn_cross.hpp

inst/include/armadillo_bits/fn_cumprod.hpp

inst/include/armadillo_bits/fn_cumsum.hpp

inst/include/armadillo_bits/fn_det.hpp

inst/include/armadillo_bits/fn_diagmat.hpp

inst/include/armadillo_bits/fn_diagvec.hpp

inst/include/armadillo_bits/fn_diff.hpp

inst/include/armadillo_bits/fn_dot.hpp

inst/include/armadillo_bits/fn_eig_gen.hpp

inst/include/armadillo_bits/fn_eig_pair.hpp

inst/include/armadillo_bits/fn_eig_sym.hpp

inst/include/armadillo_bits/fn_eigs_gen.hpp

inst/include/armadillo_bits/fn_eigs_sym.hpp

inst/include/armadillo_bits/fn_elem.hpp

inst/include/armadillo_bits/fn_eps.hpp

inst/include/armadillo_bits/fn_expmat.hpp

inst/include/armadillo_bits/fn_eye.hpp

inst/include/armadillo_bits/fn_fft.hpp

inst/include/armadillo_bits/fn_fft2.hpp

inst/include/armadillo_bits/fn_find.hpp

inst/include/armadillo_bits/fn_find_unique.hpp

inst/include/armadillo_bits/fn_flip.hpp

inst/include/armadillo_bits/fn_hist.hpp

inst/include/armadillo_bits/fn_histc.hpp

inst/include/armadillo_bits/fn_inplace_strans.hpp

inst/include/armadillo_bits/fn_inplace_trans.hpp

inst/include/armadillo_bits/fn_interp1.hpp

inst/include/armadillo_bits/fn_inv.hpp

inst/include/armadillo_bits/fn_join.hpp

inst/include/armadillo_bits/fn_kmeans.hpp

inst/include/armadillo_bits/fn_kron.hpp

inst/include/armadillo_bits/fn_log_det.hpp

inst/include/armadillo_bits/fn_logmat.hpp

inst/include/armadillo_bits/fn_lu.hpp

inst/include/armadillo_bits/fn_max.hpp

inst/include/armadillo_bits/fn_mean.hpp

inst/include/armadillo_bits/fn_median.hpp

inst/include/armadillo_bits/fn_min.hpp

inst/include/armadillo_bits/fn_misc.hpp

inst/include/armadillo_bits/fn_n_unique.hpp

inst/include/armadillo_bits/fn_nonzeros.hpp

inst/include/armadillo_bits/fn_norm.hpp

inst/include/armadillo_bits/fn_normalise.hpp

inst/include/armadillo_bits/fn_numel.hpp

inst/include/armadillo_bits/fn_ones.hpp

inst/include/armadillo_bits/fn_pinv.hpp

inst/include/armadillo_bits/fn_princomp.hpp

inst/include/armadillo_bits/fn_prod.hpp

inst/include/armadillo_bits/fn_qr.hpp

inst/include/armadillo_bits/fn_qz.hpp

inst/include/armadillo_bits/fn_randg.hpp

inst/include/armadillo_bits/fn_randi.hpp

inst/include/armadillo_bits/fn_randn.hpp

inst/include/armadillo_bits/fn_randu.hpp

inst/include/armadillo_bits/fn_rank.hpp

inst/include/armadillo_bits/fn_regspace.hpp

inst/include/armadillo_bits/fn_repmat.hpp

inst/include/armadillo_bits/fn_reshape.hpp

inst/include/armadillo_bits/fn_resize.hpp

inst/include/armadillo_bits/fn_schur.hpp

inst/include/armadillo_bits/fn_shift.hpp

inst/include/armadillo_bits/fn_shuffle.hpp

inst/include/armadillo_bits/fn_size.hpp

inst/include/armadillo_bits/fn_solve.hpp

inst/include/armadillo_bits/fn_sort.hpp

inst/include/armadillo_bits/fn_sort_index.hpp

inst/include/armadillo_bits/fn_speye.hpp

inst/include/armadillo_bits/fn_spones.hpp

inst/include/armadillo_bits/fn_sprandn.hpp

inst/include/armadillo_bits/fn_sprandu.hpp

inst/include/armadillo_bits/fn_spsolve.hpp

inst/include/armadillo_bits/fn_sqrtmat.hpp

inst/include/armadillo_bits/fn_stddev.hpp

inst/include/armadillo_bits/fn_strans.hpp

inst/include/armadillo_bits/fn_sum.hpp

inst/include/armadillo_bits/fn_svd.hpp

inst/include/armadillo_bits/fn_svds.hpp

inst/include/armadillo_bits/fn_syl_lyap.hpp

inst/include/armadillo_bits/fn_symmat.hpp

inst/include/armadillo_bits/fn_toeplitz.hpp

inst/include/armadillo_bits/fn_trace.hpp

inst/include/armadillo_bits/fn_trans.hpp

inst/include/armadillo_bits/fn_trapz.hpp

inst/include/armadillo_bits/fn_trig.hpp

inst/include/armadillo_bits/fn_trimat.hpp

inst/include/armadillo_bits/fn_trunc_exp.hpp

inst/include/armadillo_bits/fn_trunc_log.hpp

inst/include/armadillo_bits/fn_unique.hpp

inst/include/armadillo_bits/fn_var.hpp

inst/include/armadillo_bits/fn_vectorise.hpp

inst/include/armadillo_bits/fn_zeros.hpp

inst/include/armadillo_bits/glue_conv_bones.hpp

inst/include/armadillo_bits/glue_conv_meat.hpp

inst/include/armadillo_bits/glue_cor_bones.hpp

inst/include/armadillo_bits/glue_cor_meat.hpp

inst/include/armadillo_bits/glue_cov_bones.hpp

inst/include/armadillo_bits/glue_cov_meat.hpp

inst/include/armadillo_bits/glue_cross_bones.hpp

inst/include/armadillo_bits/glue_cross_meat.hpp

inst/include/armadillo_bits/glue_hist_bones.hpp

inst/include/armadillo_bits/glue_hist_meat.hpp

inst/include/armadillo_bits/glue_histc_bones.hpp

inst/include/armadillo_bits/glue_histc_meat.hpp

inst/include/armadillo_bits/glue_join_bones.hpp

inst/include/armadillo_bits/glue_join_meat.hpp

inst/include/armadillo_bits/glue_kron_bones.hpp

inst/include/armadillo_bits/glue_kron_meat.hpp

inst/include/armadillo_bits/glue_max_bones.hpp

inst/include/armadillo_bits/glue_max_meat.hpp

inst/include/armadillo_bits/glue_min_bones.hpp

inst/include/armadillo_bits/glue_min_meat.hpp

inst/include/armadillo_bits/glue_mixed_bones.hpp

inst/include/armadillo_bits/glue_mixed_meat.hpp

inst/include/armadillo_bits/glue_relational_bones.hpp

inst/include/armadillo_bits/glue_relational_meat.hpp

inst/include/armadillo_bits/glue_solve_bones.hpp

inst/include/armadillo_bits/glue_solve_meat.hpp

inst/include/armadillo_bits/glue_times_bones.hpp

inst/include/armadillo_bits/glue_times_meat.hpp

inst/include/armadillo_bits/glue_toeplitz_bones.hpp

inst/include/armadillo_bits/glue_toeplitz_meat.hpp

inst/include/armadillo_bits/glue_trapz_bones.hpp

inst/include/armadillo_bits/glue_trapz_meat.hpp

inst/include/armadillo_bits/gmm_diag_bones.hpp

inst/include/armadillo_bits/gmm_diag_meat.hpp

inst/include/armadillo_bits/gmm_misc_bones.hpp

inst/include/armadillo_bits/gmm_misc_meat.hpp

inst/include/armadillo_bits/hdf5_misc.hpp

inst/include/armadillo_bits/include_atlas.hpp

inst/include/armadillo_bits/include_hdf5.hpp

inst/include/armadillo_bits/include_superlu.hpp

inst/include/armadillo_bits/injector_bones.hpp

inst/include/armadillo_bits/injector_meat.hpp

inst/include/armadillo_bits/memory.hpp

inst/include/armadillo_bits/mtGlueCube_bones.hpp

inst/include/armadillo_bits/mtGlueCube_meat.hpp

inst/include/armadillo_bits/mtGlue_bones.hpp

inst/include/armadillo_bits/mtGlue_meat.hpp

inst/include/armadillo_bits/mtOpCube_bones.hpp

inst/include/armadillo_bits/mtOpCube_meat.hpp

inst/include/armadillo_bits/mtOp_bones.hpp

inst/include/armadillo_bits/mtOp_meat.hpp

inst/include/armadillo_bits/mtSpOp_bones.hpp

inst/include/armadillo_bits/mtSpOp_meat.hpp

inst/include/armadillo_bits/mul_gemm.hpp

inst/include/armadillo_bits/mul_gemm_mixed.hpp

inst/include/armadillo_bits/mul_gemv.hpp

inst/include/armadillo_bits/mul_herk.hpp

inst/include/armadillo_bits/mul_syrk.hpp

inst/include/armadillo_bits/newarp_DenseGenMatProd_bones.hpp

inst/include/armadillo_bits/newarp_DenseGenMatProd_meat.hpp

inst/include/armadillo_bits/newarp_DoubleShiftQR_bones.hpp

inst/include/armadillo_bits/newarp_DoubleShiftQR_meat.hpp

inst/include/armadillo_bits/newarp_EigsSelect.hpp

inst/include/armadillo_bits/newarp_GenEigsSolver_bones.hpp

inst/include/armadillo_bits/newarp_GenEigsSolver_meat.hpp

inst/include/armadillo_bits/newarp_SortEigenvalue.hpp

inst/include/armadillo_bits/newarp_SparseGenMatProd_bones.hpp

inst/include/armadillo_bits/newarp_SparseGenMatProd_meat.hpp

inst/include/armadillo_bits/newarp_SymEigsSolver_bones.hpp

inst/include/armadillo_bits/newarp_SymEigsSolver_meat.hpp

inst/include/armadillo_bits/newarp_TridiagEigen_bones.hpp

inst/include/armadillo_bits/newarp_TridiagEigen_meat.hpp

inst/include/armadillo_bits/newarp_UpperHessenbergEigen_bones.hpp

inst/include/armadillo_bits/newarp_UpperHessenbergEigen_meat.hpp

inst/include/armadillo_bits/newarp_UpperHessenbergQR_bones.hpp

inst/include/armadillo_bits/newarp_UpperHessenbergQR_meat.hpp

inst/include/armadillo_bits/newarp_cx_attrib.hpp

inst/include/armadillo_bits/op_all_bones.hpp

inst/include/armadillo_bits/op_all_meat.hpp

inst/include/armadillo_bits/op_any_bones.hpp

inst/include/armadillo_bits/op_any_meat.hpp

inst/include/armadillo_bits/op_chol_bones.hpp

inst/include/armadillo_bits/op_chol_meat.hpp

inst/include/armadillo_bits/op_clamp_bones.hpp

inst/include/armadillo_bits/op_clamp_meat.hpp

inst/include/armadillo_bits/op_cor_bones.hpp

inst/include/armadillo_bits/op_cor_meat.hpp

inst/include/armadillo_bits/op_cov_bones.hpp

inst/include/armadillo_bits/op_cov_meat.hpp

inst/include/armadillo_bits/op_cumprod_bones.hpp

inst/include/armadillo_bits/op_cumprod_meat.hpp

inst/include/armadillo_bits/op_cumsum_bones.hpp

inst/include/armadillo_bits/op_cumsum_meat.hpp

inst/include/armadillo_bits/op_cx_scalar_bones.hpp

inst/include/armadillo_bits/op_cx_scalar_meat.hpp

inst/include/armadillo_bits/op_diagmat_bones.hpp

inst/include/armadillo_bits/op_diagmat_meat.hpp

inst/include/armadillo_bits/op_diagvec_bones.hpp

inst/include/armadillo_bits/op_diagvec_meat.hpp

inst/include/armadillo_bits/op_diff_bones.hpp

inst/include/armadillo_bits/op_diff_meat.hpp

inst/include/armadillo_bits/op_dot_bones.hpp

inst/include/armadillo_bits/op_dot_meat.hpp

inst/include/armadillo_bits/op_dotext_bones.hpp

inst/include/armadillo_bits/op_dotext_meat.hpp

inst/include/armadillo_bits/op_expmat_bones.hpp

inst/include/armadillo_bits/op_expmat_meat.hpp

inst/include/armadillo_bits/op_fft_bones.hpp

inst/include/armadillo_bits/op_fft_meat.hpp

inst/include/armadillo_bits/op_find_bones.hpp

inst/include/armadillo_bits/op_find_meat.hpp

inst/include/armadillo_bits/op_find_unique_bones.hpp

inst/include/armadillo_bits/op_find_unique_meat.hpp

inst/include/armadillo_bits/op_flip_bones.hpp

inst/include/armadillo_bits/op_flip_meat.hpp

inst/include/armadillo_bits/op_hist_bones.hpp

inst/include/armadillo_bits/op_hist_meat.hpp

inst/include/armadillo_bits/op_htrans_bones.hpp

inst/include/armadillo_bits/op_htrans_meat.hpp

inst/include/armadillo_bits/op_inv_bones.hpp

inst/include/armadillo_bits/op_inv_meat.hpp

inst/include/armadillo_bits/op_logmat_bones.hpp

inst/include/armadillo_bits/op_logmat_meat.hpp

inst/include/armadillo_bits/op_max_bones.hpp

inst/include/armadillo_bits/op_max_meat.hpp

inst/include/armadillo_bits/op_mean_bones.hpp

inst/include/armadillo_bits/op_mean_meat.hpp

inst/include/armadillo_bits/op_median_bones.hpp

inst/include/armadillo_bits/op_median_meat.hpp

inst/include/armadillo_bits/op_min_bones.hpp

inst/include/armadillo_bits/op_min_meat.hpp

inst/include/armadillo_bits/op_misc_bones.hpp

inst/include/armadillo_bits/op_misc_meat.hpp

inst/include/armadillo_bits/op_nonzeros_bones.hpp

inst/include/armadillo_bits/op_nonzeros_meat.hpp

inst/include/armadillo_bits/op_norm_bones.hpp

inst/include/armadillo_bits/op_norm_meat.hpp

inst/include/armadillo_bits/op_normalise_bones.hpp

inst/include/armadillo_bits/op_normalise_meat.hpp

inst/include/armadillo_bits/op_pinv_bones.hpp

inst/include/armadillo_bits/op_pinv_meat.hpp

inst/include/armadillo_bits/op_princomp_bones.hpp

inst/include/armadillo_bits/op_princomp_meat.hpp

inst/include/armadillo_bits/op_prod_bones.hpp

inst/include/armadillo_bits/op_prod_meat.hpp

inst/include/armadillo_bits/op_relational_bones.hpp

inst/include/armadillo_bits/op_relational_meat.hpp

inst/include/armadillo_bits/op_repmat_bones.hpp

inst/include/armadillo_bits/op_repmat_meat.hpp

inst/include/armadillo_bits/op_reshape_bones.hpp

inst/include/armadillo_bits/op_reshape_meat.hpp

inst/include/armadillo_bits/op_resize_bones.hpp

inst/include/armadillo_bits/op_resize_meat.hpp

inst/include/armadillo_bits/op_shift_bones.hpp

inst/include/armadillo_bits/op_shift_meat.hpp

inst/include/armadillo_bits/op_shuffle_bones.hpp

inst/include/armadillo_bits/op_shuffle_meat.hpp

inst/include/armadillo_bits/op_sort_bones.hpp

inst/include/armadillo_bits/op_sort_index_bones.hpp

inst/include/armadillo_bits/op_sort_index_meat.hpp

inst/include/armadillo_bits/op_sort_meat.hpp

inst/include/armadillo_bits/op_sqrtmat_bones.hpp

inst/include/armadillo_bits/op_sqrtmat_meat.hpp

inst/include/armadillo_bits/op_stddev_bones.hpp

inst/include/armadillo_bits/op_stddev_meat.hpp

inst/include/armadillo_bits/op_strans_bones.hpp

inst/include/armadillo_bits/op_strans_meat.hpp

inst/include/armadillo_bits/op_sum_bones.hpp

inst/include/armadillo_bits/op_sum_meat.hpp

inst/include/armadillo_bits/op_symmat_bones.hpp

inst/include/armadillo_bits/op_symmat_meat.hpp

inst/include/armadillo_bits/op_toeplitz_bones.hpp

inst/include/armadillo_bits/op_toeplitz_meat.hpp

inst/include/armadillo_bits/op_trimat_bones.hpp

inst/include/armadillo_bits/op_trimat_meat.hpp

inst/include/armadillo_bits/op_unique_bones.hpp

inst/include/armadillo_bits/op_unique_meat.hpp

inst/include/armadillo_bits/op_var_bones.hpp

inst/include/armadillo_bits/op_var_meat.hpp

inst/include/armadillo_bits/op_vectorise_bones.hpp

inst/include/armadillo_bits/op_vectorise_meat.hpp

inst/include/armadillo_bits/operator_cube_div.hpp

inst/include/armadillo_bits/operator_cube_minus.hpp

inst/include/armadillo_bits/operator_cube_plus.hpp

inst/include/armadillo_bits/operator_cube_relational.hpp

inst/include/armadillo_bits/operator_cube_schur.hpp

inst/include/armadillo_bits/operator_cube_times.hpp

inst/include/armadillo_bits/operator_div.hpp

inst/include/armadillo_bits/operator_minus.hpp

inst/include/armadillo_bits/operator_ostream.hpp

inst/include/armadillo_bits/operator_plus.hpp

inst/include/armadillo_bits/operator_relational.hpp

inst/include/armadillo_bits/operator_schur.hpp

inst/include/armadillo_bits/operator_times.hpp

inst/include/armadillo_bits/podarray_bones.hpp

inst/include/armadillo_bits/podarray_meat.hpp

inst/include/armadillo_bits/promote_type.hpp

inst/include/armadillo_bits/restrictors.hpp

inst/include/armadillo_bits/running_stat_bones.hpp

inst/include/armadillo_bits/running_stat_meat.hpp

inst/include/armadillo_bits/running_stat_vec_bones.hpp

inst/include/armadillo_bits/running_stat_vec_meat.hpp

inst/include/armadillo_bits/sp_auxlib_bones.hpp

inst/include/armadillo_bits/sp_auxlib_meat.hpp

inst/include/armadillo_bits/span.hpp

inst/include/armadillo_bits/spdiagview_bones.hpp

inst/include/armadillo_bits/spdiagview_meat.hpp

inst/include/armadillo_bits/spglue_join_bones.hpp

inst/include/armadillo_bits/spglue_join_meat.hpp

inst/include/armadillo_bits/spglue_minus_bones.hpp

inst/include/armadillo_bits/spglue_minus_meat.hpp

inst/include/armadillo_bits/spglue_plus_bones.hpp

inst/include/armadillo_bits/spglue_plus_meat.hpp

inst/include/armadillo_bits/spglue_times_bones.hpp

inst/include/armadillo_bits/spglue_times_meat.hpp

inst/include/armadillo_bits/spop_diagmat_bones.hpp

inst/include/armadillo_bits/spop_diagmat_meat.hpp

inst/include/armadillo_bits/spop_htrans_bones.hpp

inst/include/armadillo_bits/spop_htrans_meat.hpp

inst/include/armadillo_bits/spop_max_bones.hpp

inst/include/armadillo_bits/spop_max_meat.hpp

inst/include/armadillo_bits/spop_mean_bones.hpp

inst/include/armadillo_bits/spop_mean_meat.hpp

inst/include/armadillo_bits/spop_min_bones.hpp

inst/include/armadillo_bits/spop_min_meat.hpp

inst/include/armadillo_bits/spop_misc_bones.hpp

inst/include/armadillo_bits/spop_misc_meat.hpp

inst/include/armadillo_bits/spop_strans_bones.hpp

inst/include/armadillo_bits/spop_strans_meat.hpp

inst/include/armadillo_bits/spop_sum_bones.hpp

inst/include/armadillo_bits/spop_sum_meat.hpp

inst/include/armadillo_bits/spop_var_bones.hpp

inst/include/armadillo_bits/spop_var_meat.hpp

inst/include/armadillo_bits/strip.hpp

inst/include/armadillo_bits/subview_bones.hpp

inst/include/armadillo_bits/subview_cube_bones.hpp

inst/include/armadillo_bits/subview_cube_each_bones.hpp

inst/include/armadillo_bits/subview_cube_each_meat.hpp

inst/include/armadillo_bits/subview_cube_meat.hpp

inst/include/armadillo_bits/subview_each_bones.hpp

inst/include/armadillo_bits/subview_each_meat.hpp

inst/include/armadillo_bits/subview_elem1_bones.hpp

inst/include/armadillo_bits/subview_elem1_meat.hpp

inst/include/armadillo_bits/subview_elem2_bones.hpp

inst/include/armadillo_bits/subview_elem2_meat.hpp

inst/include/armadillo_bits/subview_field_bones.hpp

inst/include/armadillo_bits/subview_field_meat.hpp

inst/include/armadillo_bits/subview_meat.hpp

inst/include/armadillo_bits/traits.hpp

inst/include/armadillo_bits/typedef_elem.hpp

inst/include/armadillo_bits/typedef_elem_check.hpp

inst/include/armadillo_bits/typedef_mat.hpp

inst/include/armadillo_bits/typedef_mat_fixed.hpp

inst/include/armadillo_bits/unwrap.hpp

inst/include/armadillo_bits/unwrap_cube.hpp

inst/include/armadillo_bits/unwrap_spmat.hpp

inst/include/armadillo_bits/upgrade_val.hpp

inst/include/armadillo_bits/wall_clock_bones.hpp

inst/include/armadillo_bits/wall_clock_meat.hpp

inst/include/armadillo_bits/wrapper_arpack.hpp

inst/include/armadillo_bits/wrapper_atlas.hpp

inst/include/armadillo_bits/wrapper_blas.hpp

inst/include/armadillo_bits/wrapper_lapack.hpp

inst/include/armadillo_bits/wrapper_superlu.hpp

inst/include/armadillo_bits/xtrans_mat_bones.hpp

inst/include/armadillo_bits/xtrans_mat_meat.hpp

inst/include/armadillo_bits/xvec_htrans_bones.hpp

inst/include/armadillo_bits/xvec_htrans_meat.hpp

man/ATM_f.Rd
man/ATM_f_c.Rd
man/ATM_fhd.Rd
man/ATM_l.Rd
man/ATM_l_c.Rd
man/ATM_lhd.Rd
man/ATM_r1.Rd
man/Bayes_var.Rd
man/C_likelihood.Rd
man/Fval.Rd
man/backfitting.Rd
man/change_to_mat.Rd
man/diag_mle.Rd
man/eigen_plot.Rd
man/flash.Rd
man/flash_hd.Rd
man/flash_r1.Rd
man/flash_r1c.Rd
man/form_mean.Rd
man/form_outer.Rd
man/get_kth_column.Rd
man/get_kth_tensor.Rd
man/greedy.Rd
man/inital_Bayes_var.Rd
man/initial_value.Rd
man/list_prod.Rd
man/mle_update_modek.Rd
man/noisy_var.Rd
man/obj.Rd
man/one_step_update.Rd
man/replace_factors.Rd
man/rescale_factors.Rd
man/rescale_sigmae2.Rd
man/sigma_est.Rd
man/sigmae2_v_est.Rd
man/sigmaest.Rd
man/tbackfitting.Rd
man/tflash.Rd
man/tflash_homo.Rd
man/tflash_kron.Rd
man/tgreedy.Rd
man/tinit_components.Rd
man/tinit_components_one.Rd
man/tinit_kron_components.Rd
man/tupdate_kron_modek.Rd
man/tupdate_kron_sig.Rd
man/tupdate_modek.Rd
man/tupdate_sig.Rd
src/.DS_Store

src/ATM.cpp

src/ATM.o

src/Makevars

src/Makevars.win

src/RcppExports.cpp

src/RcppExports.o

src/flashr.so

src/rcpparma_hello_world.o

tests/ash_error.R
tests/ash_error_list.rda

tests/data_prepare.R
tests/deng_counts_TF.rda

tests/flash.R
tests/flash_nmf_test.R
tests/testthat.R
tests/testthat/test_backfitting.R
tests/testthat/test_flashvstflash.R
tests/testthat/test_is_zero_factor.R
tests/testthat/test_known_factors.R
tests/testthat/test_kronecker.R
vignettes/figure/flash_multipanel_grid-1.png

vignettes/figure/flash_structure-1.png

vignettes/flash.Rmd
vignettes/flash.html

vignettes/flashonNMF.Rmd
vignettes/flashr_vig.Rnw

vignettes/flashr_vig.bbl

vignettes/flashr_vig.blg

vignettes/flashr_vig.log

vignettes/flashr_vig.pdf
vignettes/flashr_vig.tex

vignettes/flashr_vig.toc

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