corPlot: A function to plot the relationship between Gst, G'st, Theta,...
In kkeenan02/diveRsity-dev: Genetic diversity partition statistics and Informative locus selection using Fst, Gst, Dest(Jost Chao) G'st and In.
Description
Usage
Arguments
Details
Author(s)
View source: R/diveRsity-code.R
Description
corPlot uses the information calculated by divPart and readGenepop to plot and calculate the relationship between Gst, G'st, Theta, D (Jost) and the number of alleles per locus. This information can then be used to assess the likelyhood that data derived from the loci is suitable for the calculation of population demography. This is based on the assumption that where u > m, demographic process are obscured by mutation.
Usage
1
corPlot(x, y)
Arguments
x
Results object returned from the function readGenepop.user
y
Results object returned from the function divPart
Details
This function returns an R plot for Fst (theta) vs number of alleles, Gst vs number of alleles, G'st vs number of alleles and D (Jost) vs number of alleles.
Author(s)
Kevin Keenan <kkeenan02@qub.ac.uk>
kkeenan02/diveRsity-dev documentation built on May 20, 2019, 10:46 a.m.
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Description Usage Arguments Details Author(s)
View source: R/diveRsity-code.R
Description
corPlot uses the information calculated by divPart and readGenepop to plot and calculate the relationship between Gst, G'st, Theta, D (Jost) and the number of alleles per locus. This information can then be used to assess the likelyhood that data derived from the loci is suitable for the calculation of population demography. This is based on the assumption that where u > m, demographic process are obscured by mutation.
Usage
1 | corPlot(x, y)
|
Arguments
x |
Results object returned from the function |
y |
Results object returned from the function |
Details
This function returns an R plot for Fst (theta) vs number of alleles, Gst vs number of alleles, G'st vs number of alleles and D (Jost) vs number of alleles.
Author(s)
Kevin Keenan <kkeenan02@qub.ac.uk>
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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