diffPlot: A function to plot pairwise statistics calculated by divPart.
In kkeenan02/diveRsity: A Comprehensive, General Purpose Population Genetics Analysis Package
Description
Usage
Arguments
Details
Author(s)
Description
This function uses results from divPart to plot pairwise statistic estimators.
Usage
1
diffPlot(x, outfile = NULL, interactive = FALSE)
Arguments
x
Results object returned from the function 'divPart'
outfile
A character string indication the folder location to which plot files should be written.
interactive
A logical argument indication whether the package 'sendplot' should be used to plot 'divPart' pairwise results.
Details
A number of heatmap style plots of pairwise differentiation are generated. The function takes the output from either fastDivPart or diffPlot and writes interactive HTML plots to file. The number of plots depends on the input structure. For instance, if fst = FALSE in either fastDivPart or diffCalc, then a plot containing pairwise Fst will be produced.
Author(s)
Kevin Keenan <kkeenan02@qub.ac.uk>
kkeenan02/diveRsity documentation built on May 20, 2019, 10:43 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Details Author(s)
Description
This function uses results from divPart to plot pairwise statistic estimators.
Usage
1 | diffPlot(x, outfile = NULL, interactive = FALSE)
|
Arguments
x |
Results object returned from the function 'divPart' |
outfile |
A character string indication the folder location to which plot files should be written. |
interactive |
A logical argument indication whether the package 'sendplot' should be used to plot 'divPart' pairwise results. |
Details
A number of heatmap style plots of pairwise differentiation are generated. The function takes the output from either fastDivPart or diffPlot and writes interactive HTML plots to file. The number of plots depends on the input structure. For instance, if fst = FALSE in either fastDivPart or diffCalc, then a plot containing pairwise Fst will be produced.
Author(s)
Kevin Keenan <kkeenan02@qub.ac.uk>
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.