sequence_annotation: An example dataframe containing GO annotations identified...

In klarakaleb/OmaDB: R wrapper for the OMA REST API

An example dataframe containing GO annotations identified from a given sequence.

Description

An example dataframe containing GO annotations identified from a given sequence.

Usage

sequence_annotation

Format

A dataframe with 13 variables:

Qualifier

qualifier of the annotation

GO_ID

GO term for the annotation

With

GO term for the annotation

Evidence

evidence for the annotation

Date

date

DB_Object_Type

identified object type

DB_Object_Name

identified object name

Aspect

aspect

Assigned_By

assignment of the annotation

GO_name

GO term name

DB

database

DB.Reference

database reference

Synonym

synonym

...

Source

https://omabrowser.org/api/function/?query=MNDPSLLGYPNVGPQQQQQQQQQQHAGLLGKGTPNALQQQLHMNQLTGIPPPGLMNNSDVHTSSNNNSRQLLDQLANGNANMLNMNMDNNNNNNNNNNNNNNNGGGSGVMMNASTAAVNSIGMVPTVGTPVNINVNASNPLLHPHLDDPSLLNNPIWKLQLHLAAVSAQSLGQPNIYARQNAMKKYLATQQAQQAQQQAQQQAQQQVPGPFGPGPQAAPPALQPTDFQQSHIAEASKSLVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVSTPLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHER

klarakaleb/OmaDB documentation built on April 18, 2024, 8:03 a.m.