Files in knifecake/fafreqs
Common Frequency Databases for Forensic Markers
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/data.R
R/freqt.R
R/kits.R
R/population-stats.R
R/read.R
R/shiny.R
R/sysdata.rda
R/utils.R
R/write.R
README.Rmd
README.md
data-raw/ferdous-2010-bangladesh-chakma.csv
data-raw/ferdous-2010-bangladesh-tripura.csv
data-raw/marker_metadata.R
data-raw/marker_metadata.csv
data-raw/nist-african-american.csv
data-raw/nist-all.csv
data-raw/nist-asian.csv
data-raw/nist-caucasian.csv
data-raw/nist-hispanic.csv
data-raw/nist.R
data-raw/papers.R
data-raw/popSTR-NW-spain.csv
data-raw/popSTR-algeria-mzab-mozabite.csv
data-raw/popSTR-bougainville-NAN-melanesian.csv
data-raw/popSTR-brazil-karitiana.csv
data-raw/popSTR-brazil-surui.csv
data-raw/popSTR-cambodia-cambodian.csv
data-raw/popSTR-central-african-republic-biaka-pygmies.csv
data-raw/popSTR-china-dai.csv
data-raw/popSTR-china-daur.csv
data-raw/popSTR-china-han.csv
data-raw/popSTR-china-hezhen.csv
data-raw/popSTR-china-lahu.csv
data-raw/popSTR-china-miaozu.csv
data-raw/popSTR-china-mongola.csv
data-raw/popSTR-china-naxi.csv
data-raw/popSTR-china-oroqen.csv
data-raw/popSTR-china-she.csv
data-raw/popSTR-china-tu.csv
data-raw/popSTR-china-tujia.csv
data-raw/popSTR-china-uygur.csv
data-raw/popSTR-china-xibo.csv
data-raw/popSTR-china-yizu.csv
data-raw/popSTR-colombia-colombian.csv
data-raw/popSTR-d-r-congo-mbuti-pygmies.csv
data-raw/popSTR-dominican-republic.csv
data-raw/popSTR-europe.csv
data-raw/popSTR-israel-carmel-druze.csv
data-raw/popSTR-israel-central-palestinian.csv
data-raw/popSTR-israel-negev-bedouin.csv
data-raw/popSTR-japan-japanese.csv
data-raw/popSTR-kenya-bantu-NE.csv
data-raw/popSTR-mexico-maya.csv
data-raw/popSTR-mexico-pima.csv
data-raw/popSTR-namibia-san.csv
data-raw/popSTR-new-guinea-papuan.csv
data-raw/popSTR-nigeria-yoruba.csv
data-raw/popSTR-pakistan-balochi.csv
data-raw/popSTR-pakistan-brahui.csv
data-raw/popSTR-pakistan-burusho.csv
data-raw/popSTR-pakistan-hazara.csv
data-raw/popSTR-pakistan-kalash.csv
data-raw/popSTR-pakistan-makrani.csv
data-raw/popSTR-pakistan-pathan.csv
data-raw/popSTR-pakistan-sindhi.csv
data-raw/popSTR-senegal-mandenka.csv
data-raw/popSTR-siberia-yakut.csv
data-raw/popSTR-somalia.csv
data-raw/popSTR-south-africa-bantu.csv
data-raw/pop_STR.R
data-raw/strider-2015.xml
data-raw/strider.R
data-raw/zeyad-2020-uae-ystrs.csv
data/ft_ferdous2010_bangladesh_chakma.rda
data/ft_ferdous2010_bangladesh_tripura.rda
data/ft_nist_african_american.rda
data/ft_nist_all.rda
data/ft_nist_asian.rda
data/ft_nist_caucasian.rda
data/ft_nist_hispanic.rda
data/ft_popstr_algeria_mzab_mozabite.rda
data/ft_popstr_bougainville_nan_melanesian.rda
data/ft_popstr_brazil_karitiana.rda
data/ft_popstr_brazil_surui.rda
data/ft_popstr_cambodia_cambodian.rda
data/ft_popstr_central_african_republic_biaka_pygmies.rda
data/ft_popstr_china_dai.rda
data/ft_popstr_china_daur.rda
data/ft_popstr_china_han.rda
data/ft_popstr_china_hezhen.rda
data/ft_popstr_china_lahu.rda
data/ft_popstr_china_miaozu.rda
data/ft_popstr_china_mongola.rda
data/ft_popstr_china_naxi.rda
data/ft_popstr_china_oroqen.rda
data/ft_popstr_china_she.rda
data/ft_popstr_china_tu.rda
data/ft_popstr_china_tujia.rda
data/ft_popstr_china_uygur.rda
data/ft_popstr_china_xibo.rda
data/ft_popstr_china_yizu.rda
data/ft_popstr_colombia_colombian.rda
data/ft_popstr_d_r_congo_mbuti_pygmies.rda
data/ft_popstr_dominican_republic.rda
data/ft_popstr_europe.rda
data/ft_popstr_israel_carmel_druze.rda
data/ft_popstr_israel_central_palestinian.rda
data/ft_popstr_israel_negev_bedouin.rda
data/ft_popstr_japan_japanese.rda
data/ft_popstr_kenya_bantu_ne.rda
data/ft_popstr_mexico_maya.rda
data/ft_popstr_mexico_pima.rda
data/ft_popstr_namibia_san.rda
data/ft_popstr_new_guinea_papuan.rda
data/ft_popstr_nigeria_yoruba.rda
data/ft_popstr_nw_spain.rda
data/ft_popstr_pakistan_balochi.rda
data/ft_popstr_pakistan_burusho.rda
data/ft_popstr_pakistan_hazara.rda
data/ft_popstr_pakistan_kalash.rda
data/ft_popstr_pakistan_makrani.rda
data/ft_popstr_pakistan_pathan.rda
data/ft_popstr_pakistan_sindhi.rda
data/ft_popstr_senegal_mandenka.rda
data/ft_popstr_siberia_yakut.rda
data/ft_popstr_somalia.rda
data/ft_popstr_south_africa_bantu.rda
data/ft_strider_austria.rda
data/ft_strider_belgium.rda
data/ft_strider_bosnia_herzegowina.rda
data/ft_strider_czech_republic.rda
data/ft_strider_denmark.rda
data/ft_strider_finland.rda
data/ft_strider_france.rda
data/ft_strider_germany.rda
data/ft_strider_greece.rda
data/ft_strider_hungary.rda
data/ft_strider_ireland.rda
data/ft_strider_montenegro.rda
data/ft_strider_norway.rda
data/ft_strider_poland.rda
data/ft_strider_slovakia.rda
data/ft_strider_slovenia.rda
data/ft_strider_spain.rda
data/ft_strider_sweden.rda
data/ft_strider_switzerland.rda
data/ft_zeyad2020_uae_ystrs.rda
fafreqs.Rproj
inst/fafreqs_shiny/about.md
inst/fafreqs_shiny/app.R
man/add_rogue_allele.Rd
man/alleles.Rd
man/as.data.frame.freqt.Rd
man/data_nist.Rd
man/data_popstr.Rd
man/data_strider.Rd
man/expected_heterozygosity.Rd
man/exporting_data.Rd
man/fafreqs_gui.Rd
man/fafreqs_widget.Rd
man/fafreqs_widget_input.Rd
man/ferbous2010.Rd
man/figures/fafreqs-widget-screenshot.png
man/filter_markers.Rd
man/freqt.Rd
man/frequencies.Rd
man/ft_zeyad2020_uae_ystrs.Rd
man/get_marker_kit.Rd
man/guess_chromosome_numbers.Rd
man/importing_data.Rd
man/markers.Rd
man/normalise.Rd
man/observed_heterozygosity.Rd
man/print.freqt.Rd
man/read_allelic_ladder.Rd
man/remove_all_na_columns.Rd
man/rownames_to_column.Rd
man/standard_marker_names.Rd
man/standarise_names.Rd
man/to_pedtools_locusAttributes.Rd
man/to_pedtools_markers.Rd
