add_rogue_allele: Add a rogue allele column

Description Usage Arguments Examples

View source: R/utils.R

Description

Adds an extra allele to every marker with frequency equal to 1 minus the sum of the frequencies of the alleles in that marker. Note: if the frequencies sum up to greater than one, then the rogue allele column will have negative frequencies.

Usage

1
add_rogue_allele(x, ms = NULL, name = "rare")

Arguments

x

a freqt object

ms

a marker or marker vector. If left undefined, then all markers are processed.

name

the name to give to the rogue allele

Examples

1

knifecake/fafreqs documentation built on March 13, 2020, 11:53 p.m.