Man pages for knifecake/fafreqs
Common Frequency Databases for Forensic Markers
| add_rogue_allele | Add a rogue allele column |
| alleles | Get alleles of marker |
| as.data.frame.freqt | Convert a 'freqt' to a 'data.frame' |
| data_nist | NIST: US Allele frequencies |
| data_popstr | pop.STR allele frequencies |
| data_strider | STRidER 2.0 |
| expected_heterozygosity | Calculate the expected heterozygosity |
| exporting_data | Write a frequency table |
| fafreqs_gui | Launch the fafreqs GUI |
| fafreqs_widget | Frequency database loader |
| fafreqs_widget_input | Frequency database loader input |
| ferbous2010 | Ferdous 2010: Bangladesh |
| filter_markers | Filter markers in a 'freqt' object |
| freqt | Create a 'freqt' object |
| frequencies | Get allele frequencies |
| ft_zeyad2020_uae_ystrs | Zeyad 2020: United Arab Emirates Y-STRs |
| get_marker_kit | Standard Amplification Kits |
| guess_chromosome_numbers | Guess chromosome numbers |
| importing_data | Parse common allele frequency data formats |
| markers | Get markers in a 'freqt' object |
| normalise | Normalise a frequency database |
| observed_heterozygosity | Observed Heterozygosity |
| print.freqt | Printing frequency tables |
| read_allelic_ladder | Read data in allelic ladder format |
| remove_all_na_columns | Remove columns where every row is NA |
| rownames_to_column | Convert rownames to the first column |
| standard_marker_names | Standarise marker names |
| standarise_names | Standarise marker names |
| to_pedtools_locusAttributes | Convert a 'freqt' object to the pedtools 'locusAttributes'... |
| to_pedtools_markers | Convert a 'freqt' object to a list of marker objects |
